RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 LMO1P25800 156 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 MAPK3P27361 379 aaPredicted RBP10.97□□□□□ -0.65
CLK3-213ENST00000563842 DUSP1P28562 367 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 BDKRB2P30411 391 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 ZP1P60852 638 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 RIPK1Q13546 671 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 GRK1Q15835 563 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 MIDNQ504T8 468 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 C17orf107Q6ZR85 190 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 LDLRAD3Q86YD5 345 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 TNFAIP8L1Q8WVP5 186 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 PGLYRP3Q96LB9 341 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 C1orf147Q96MC9 270 aaPredicted RBP10.97□□□□□ -0.65
CLK3-213ENST00000563842 CDCA4Q9BXL8 241 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 ANKRD60Q9BZ19 345 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 DPAGT1Q9H3H5 408 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 PCDHB16Q9NRJ7 776 aa10.97□□□□□ -0.65
CLK3-213ENST00000563842 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
CLK3-213ENST00000563842 SOX21Q9Y651 276 aaPredicted RBP10.97□□□□□ -0.65
CLK3-213ENST00000563842 A0A0U1RQK1 487 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 TMEM82A0PJX8 343 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 MEIOCA2RUB1 952 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 BTBD17A6NE02 478 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 C17orf98A8MV24 154 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 GPX5O75715 221 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 CRYBA1P05813 215 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 MELTFP08582 738 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 ZNF728P0DKX0 622 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 ZNF44P15621 663 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 CELP19835 753 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 ERP29P30040 261 aaKnown RBP10.96□□□□□ -0.65
CLK3-213ENST00000563842 ZNF93P35789 620 aaPredicted RBP10.96□□□□□ -0.65
CLK3-213ENST00000563842 SNU13P55769 128 aaKnown RBP10.96□□□□□ -0.65
CLK3-213ENST00000563842 RPL15P61313 204 aaKnown RBP10.96□□□□□ -0.65
CLK3-213ENST00000563842 KLRD1Q13241 179 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 RSU1Q15404 277 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 DDI2Q5TDH0 399 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 ELP2Q6IA86 826 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 PIP4P2Q8N4L2 257 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 ZFP41Q8N8Y5 198 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 OR52N4Q8NGI2 321 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 OR51A2Q8NGJ7 313 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 FAM192AQ9GZU8 254 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 IL36RNQ9UBH0 155 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 LINC00312Q9Y6C7 94 aa10.96□□□□□ -0.65
CLK3-213ENST00000563842 SIRPB1O00241 398 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 GABRPO00591 440 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 DEGS1O15121 323 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 ZNF780AO75290 641 aaPredicted RBP10.95□□□□□ -0.66
CLK3-213ENST00000563842 OR2H2O95918 312 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 CSTBP04080 98 aaKnown RBP10.95□□□□□ -0.66
CLK3-213ENST00000563842 CALCBP10092 127 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 CCL3L1P16619 93 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 FSTP19883 344 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 SAA4P35542 130 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 TGFBR2P37173 567 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 PTGFRP43088 359 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 LGALS4P56470 323 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 SCN1BQ07699 218 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 EDDM3AQ14507 147 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 ZNF273Q14593 569 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 IL13RA2Q14627 380 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 SPHARQ15513 63 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 IZUMO2Q6UXV1 221 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 RNF144BQ7Z419 303 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 MS4A15Q8N5U1 240 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 OR13C5Q8NGS8 318 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 ZNF714Q96N38 554 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 CHST6Q9GZX3 395 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 METTL9Q9H1A3 318 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 FOXJ3Q9UPW0 622 aa10.95□□□□□ -0.66
CLK3-213ENST00000563842 UBE2J1Q9Y385 318 aaPredicted RBP10.95□□□□□ -0.66
CLK3-213ENST00000563842 PNMA8CA0A1B0GUJ8 204 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 A0A1W2PRD5 423 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 A0A1W2PRF3 423 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 A0A1W2PRM7 423 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 HAX1O00165 279 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 PSPNO60542 156 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 ATP6V1G2O95670 118 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 CSN2P05814 226 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 IGFBP3P17936 291 aaPredicted RBP10.94□□□□□ -0.66
CLK3-213ENST00000563842 IER3P46695 156 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 OR3A1P47881 315 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 P2RX3P56373 397 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 RPS11P62280 158 aaKnown RBP eCLIP10.94□□□□□ -0.66
CLK3-213ENST00000563842 SLC35A2P78381 396 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 DOC2BQ14184 412 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 GPR176Q14439 515 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 ASPHD2Q6ICH7 369 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 ASCL4Q6XD76 172 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 TRAPPC6BQ86SZ2 158 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 CDH26Q8IXH8 852 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 C11orf42Q8N5U0 333 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 C3orf56Q8N813 242 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 Q8NFD4 153 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 OR4S1Q8NGB4 309 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 OR51T1Q8NGJ9 327 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 OR13D1Q8NGV5 346 aa10.94□□□□□ -0.66
CLK3-213ENST00000563842 DYRK2Q92630 601 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms