RNA–Protein interactions for RNA: ENST00000563498.1

NME3-204, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2 BASIC

Gene NME3, Length 920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-204ENST00000563498 ETV3LQ6ZN32 361 aa14.84□□□□□ -0.03
NME3-204ENST00000563498 BCDIN3DQ7Z5W3 292 aaKnown RBP14.84□□□□□ -0.03
NME3-204ENST00000563498 YIPF7Q8N8F6 280 aa14.84□□□□□ -0.03
NME3-204ENST00000563498 FUOMA2VDF0 154 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ATP8B1O43520 1251 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ENTPD6O75354 484 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 DUSP1P28562 367 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 NPBWR2P48146 333 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 THBS3P49746 956 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 RBP2P50120 134 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ATP1B3P54709 279 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 GNGT1P63211 74 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ODF4Q2M2E3 257 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 CCDC144NLQ6NUI1 221 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 BAIAP2L2Q6UXY1 529 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 TMEM163Q8TC26 289 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 BCAS4Q8TDM0 211 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 PP6455Q8WZ26 134 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ADI1Q9BV57 179 aa14.83□□□□□ -0.04
NME3-204ENST00000563498 ZMAT5Q9UDW3 170 aaKnown RBP14.83□□□□□ -0.04
NME3-204ENST00000563498 A0A087X0M5 115 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 A0A1B0GX30 115 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 PSMB11A5LHX3 300 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 SH2D7A6NKC9 451 aaPredicted RBP14.82□□□□□ -0.04
NME3-204ENST00000563498 LY6LH3BQJ8 138 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 BUB1B-PAK6H3BSN5 160 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 T-ENOLP0DO92 83 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 BCL3P20749 454 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 MNDAP41218 407 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 HLA-DRB5Q30154 266 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 TPTE2P1Q5T6R2 138 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 SSX6Q7RTT6 188 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 GID4Q8IVV7 300 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 TCEANCQ8N8B7 351 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 ZNF286AQ9HBT8 521 aa14.82□□□□□ -0.04
NME3-204ENST00000563498 METTL15A6NJ78 407 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 H3BSH0 61 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 TOR1AO14656 332 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 SH2D1BO14796 132 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 FKBP6O75344 327 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 SULT1C4O75897 302 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 FAM106CPP0CH98 169 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 PRKACAP17612 351 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 LMO1P25800 156 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 DAPP51397 102 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 PRRX1P54821 245 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 RPL23AP62750 156 aaKnown RBP14.81□□□□□ -0.04
NME3-204ENST00000563498 C9orf152Q5JTZ5 239 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 THNSL2Q86YJ6 484 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 ZNF649Q9BS31 505 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 HMG20AQ9NP66 347 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 MOB4Q9Y3A3 225 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 HSPE1-MOB4S4R3N1 261 aa14.81□□□□□ -0.04
NME3-204ENST00000563498 M0R129 80 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 SIRPB1O00241 398 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 OR2H2O95918 312 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 FAM107AO95990 144 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 CSN2P05814 226 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 OR2T7P0C7T2 308 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 NHLRC4P0CG21 123 aaPredicted RBP14.8□□□□□ -0.04
NME3-204ENST00000563498 UBCP0CG48 685 aaKnown RBP14.8□□□□□ -0.04
NME3-204ENST00000563498 GDNFP39905 211 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 PTGFRP43088 359 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 POU3F4P49335 361 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 MTCP1P56278 107 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 KPNB1Q14974 876 aaKnown RBP14.8□□□□□ -0.04
NME3-204ENST00000563498 THTPAQ9BU02 230 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 EXOSC4Q9NPD3 245 aaKnown RBP14.8□□□□□ -0.04
NME3-204ENST00000563498 PCDHB16Q9NRJ7 776 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 ZFP57Q9NU63 452 aa14.8□□□□□ -0.04
NME3-204ENST00000563498 WARS2Q9UGM6 360 aaKnown RBP14.8□□□□□ -0.04
NME3-204ENST00000563498 IGKV1-9A0A0C4DH69 117 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 LOC107986453A0A1B0GWG9 222 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 A0A1W2PQL4 384 aaPredicted RBP14.79□□□□□ -0.04
NME3-204ENST00000563498 ODAMA1E959 279 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM172BPA6NC97 362 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A18PA6NE21 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A16PA6NEW6 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A20PA6NIJ5 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A9PA6NNJ1 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 ZAR1LA6NP61 321 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A12PA8MX19 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A5PA8MXJ8 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A15PP0C7V4 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A13PP0C7W8 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A14PP0C7W9 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 FAM90A24PP0C7X0 464 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 PRKACBP22694 351 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 MYCNOSP40205 109 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 GLIPR1P48060 266 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 AESQ08117 197 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 PDZK1IP1Q13113 114 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 C12orf73Q69YU5 71 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 UNQ9370/PRO34162Q6UXP9 181 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 UTS2BQ765I0 119 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 OR2W3Q7Z3T1 314 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 SPATA24Q86W54 205 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 PRSS35Q8N3Z0 413 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 OR4D6Q8NGJ1 314 aa14.79□□□□□ -0.04
NME3-204ENST00000563498 CHPT1Q8WUD6 406 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms