RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 CCDC28AQ8IWP9 274 aa18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 RBPMSQ93062 196 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 MARS2Q96GW9 593 aaKnown RBP18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 OR10C1Q96KK4 312 aa18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 SYT3Q9BQG1 590 aa18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 OR51B6Q9H340 312 aa18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 RIMS4Q9H426 269 aaPredicted RBP18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 ZNF318Q5VUA4 2279 aa18.28■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 F5H0A9 414 aaPredicted RBP18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 GLAP06280 429 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 IL32P24001 234 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 LUMP51884 338 aaPredicted RBP18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 PPP1CBP62140 327 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 GABRA6Q16445 453 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 GCNT2Q8N0V5 402 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 BATF2Q8N1L9 274 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 ZADH2Q8N4Q0 377 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 CCDC71LQ8N9Z2 235 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 C1orf162Q8NEQ5 155 aaPredicted RBP18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 GTF3AQ92664 365 aaKnown RBP18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 GALNT14Q96FL9 552 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 MICU1Q9BPX6 476 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 RTL8AQ9BWD3 113 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 SUCNR1Q9BXA5 334 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 WDR13Q9H1Z4 485 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 SESN1Q9Y6P5 492 aa18.27■□□□□ 0.52
VPS9D1-AS1-202ENST00000562866 SYNGR1O43759 233 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PRKACAP17612 351 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FXYD4P59646 89 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RBM39Q14498 530 aaKnown RBP18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 BEX5Q5H9J7 111 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 BOD1Q96IK1 185 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 OR51I2Q9H344 312 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 Q9N2K0 584 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 DNAJB11Q9UBS4 358 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 KCNMB2Q9Y691 235 aa18.27■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CACNA1HO95180 2353 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 KIR2DS1A0A191URI9 304 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 AHRRA9YTQ3 701 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 F8VVB4 439 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 F8VWA3 439 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 J3QT63 122 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SMPD2O60906 423 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 NAPSAO96009 420 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SELEP16581 610 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CA6P23280 308 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 HOXC12P31275 282 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 KIR2DS4P43632 304 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IDH3GP51553 393 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IL15RAQ13261 267 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 KIR2DS1Q14954 304 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RTP5Q14D33 572 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CNEP1R1Q8N9A8 125 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PRSS33Q8NF86 280 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RTN4IP1Q8WWV3 396 aaPredicted RBP18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PRRX2Q99811 253 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SDHAF2Q9NX18 166 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RASL12Q9NYN1 266 aa18.26■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 MPTX1A8MV57 137 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SHOXO15266 292 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LYZL6O75951 148 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 NOVA1P51513 510 aaKnown RBP18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FAM185AQ8N0U4 392 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 NEK7Q8TDX7 302 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RSRP1Q9BUV0 290 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 GSKIPQ9P0R6 139 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 PTPRBP23467 1997 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 MFSD2BA6NFX1 497 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 H0YIZ8 118 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LILRA1O75019 489 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 DIRAS3O95661 229 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CTXN2P0C2S0 81 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RAC2P15153 192 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 AADACP22760 399 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 EIF2S3P41091 472 aaKnown RBP18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IAH1Q2TAA2 248 aaPredicted RBP18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SPATA46Q5T0L3 261 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 FAM58AQ8N1B3 248 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 STOML3Q8TAV4 291 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CXorf58Q96LI9 332 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 SLC2A9Q9NRM0 540 aa18.25■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 POM121CA8CG34 1229 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TK1P04183 234 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CELA3BP08861 270 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 CBR1P16152 277 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 COX5AP20674 150 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 KIR2DL2P43627 348 aaPredicted RBP18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 NAAAQ02083 359 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 RAB32Q13637 225 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 TMEM187Q14656 261 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 ZNF169Q14929 603 aaPredicted RBP18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 Q6ZPA2 131 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 Q8IYB0 196 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LRTM2Q8N967 370 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 C9orf106Q8NAJ2 232 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 AQP10Q96PS8 301 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 HS3ST6Q96QI5 342 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 REG4Q9BYZ8 158 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 IFT22Q9H7X7 185 aa18.24■□□□□ 0.51
VPS9D1-AS1-202ENST00000562866 LRP5LA4QPB2 252 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms