RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 DDI2Q5TDH0 399 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 ELP2Q6IA86 826 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 BRD3OSQ6XYD6 125 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 OR8H2Q8N162 312 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 MS4A15Q8N5U1 240 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 Q9H521 79 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 METTL8Q9H825 291 aaKnown RBP13.59□□□□□ -0.23
CDT1-202ENST00000562747 UNKLQ9H9P5 680 aaKnown RBP13.59□□□□□ -0.23
CDT1-202ENST00000562747 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
CDT1-202ENST00000562747 C19orf12Q9NSK7 152 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 FOXJ3Q9UPW0 622 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 GSTK1Q9Y2Q3 226 aa13.59□□□□□ -0.23
CDT1-202ENST00000562747 IGHV1-69DA0A0B4J2H0 117 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 IGHV1-69P01742 117 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 CALCBP10092 127 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 DUSP1P28562 367 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 ZNF93P35789 620 aaPredicted RBP13.58□□□□□ -0.24
CDT1-202ENST00000562747 TGFBR2P37173 567 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 MTNR1BP49286 362 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 GUCA2AQ02747 115 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 SHISA2Q6UWI4 295 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 C17orf107Q6ZR85 190 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 GDPD3Q7L5L3 318 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 PPP1R35Q8TAP8 253 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 TNFAIP8L1Q8WVP5 186 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 TAF15Q92804 592 aaKnown RBP eCLIP13.58□□□□□ -0.24
CDT1-202ENST00000562747 ORAI1Q96D31 301 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 ZNF48Q96MX3 618 aaPredicted RBP13.58□□□□□ -0.24
CDT1-202ENST00000562747 DERL3Q96Q80 235 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 ISYNA1Q9NPH2 558 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 SIRT7Q9NRC8 400 aa13.58□□□□□ -0.24
CDT1-202ENST00000562747 TRAV8-7A0A075B6U6 113 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 TMEM82A0PJX8 343 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 DNAJC9-AS1A6NH13 148 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 DENRO43583 198 aaKnown RBP13.57□□□□□ -0.24
CDT1-202ENST00000562747 PRTN3P24158 256 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 LMO1P25800 156 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 PTGFRP43088 359 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 SNU13P55769 128 aaKnown RBP13.57□□□□□ -0.24
CDT1-202ENST00000562747 RUSC1-AS1Q66K80 236 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 NCR3LG1Q68D85 454 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 TMEM200BQ69YZ2 307 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 ASCL4Q6XD76 172 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 CHST4Q8NCG5 386 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 Q8NFD4 153 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 OR4M1Q8NGD0 313 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 UFD1Q92890 307 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 CCDC90BQ9GZT6 254 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 FAM192AQ9GZU8 254 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 PRDM13Q9H4Q3 707 aa13.57□□□□□ -0.24
CDT1-202ENST00000562747 ZMAT3Q9HA38 289 aaKnown RBP13.57□□□□□ -0.24
CDT1-202ENST00000562747 hCG_1809904A0A1W2PP81 198 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 A0A1W2PPE2 198 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 A0A1W2PPK0 400 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 A0A1W2PR64 198 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 A0A1W2PRV1 198 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 MGST3O14880 152 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 PSPNO60542 156 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 OR2H2O95918 312 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 GABRR1P24046 479 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 EEF1B2P24534 225 aaKnown RBP13.56□□□□□ -0.24
CDT1-202ENST00000562747 OR3A4PP47883 348 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 EDDM3BP56851 147 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 MEF2CQ06413 473 aaPredicted RBP13.56□□□□□ -0.24
CDT1-202ENST00000562747 FOXL1Q12952 345 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 RSU1Q15404 277 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 GRK1Q15835 563 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 PDLIM3Q53GG5 364 aaPredicted RBP13.56□□□□□ -0.24
CDT1-202ENST00000562747 UNQ9370/PRO34162Q6UXP9 181 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 CDH26Q8IXH8 852 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 OR51T1Q8NGJ9 327 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 TNFRSF14Q92956 283 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 NOX4Q9NPH5 578 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 IL36GQ9NZH8 169 aa13.56□□□□□ -0.24
CDT1-202ENST00000562747 SOX21Q9Y651 276 aaPredicted RBP13.56□□□□□ -0.24
CDT1-202ENST00000562747 RNASEK-C17orf49H0YIS7 233 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 SIRPB1O00241 398 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 PIN1P1O15428 100 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 MRPS14O60783 128 aaKnown RBP13.55□□□□□ -0.24
CDT1-202ENST00000562747 ZNF44P15621 663 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 ERP29P30040 261 aaKnown RBP13.55□□□□□ -0.24
CDT1-202ENST00000562747 OR3A1P47881 315 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 GABARAPL2P60520 117 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 MLLT11Q13015 90 aaPredicted RBP13.55□□□□□ -0.24
CDT1-202ENST00000562747 BAMBIQ13145 260 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 TPBGQ13641 420 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 ZNF273Q14593 569 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 IL13RA2Q14627 380 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 TBCEQ15813 527 aaPredicted RBP13.55□□□□□ -0.24
CDT1-202ENST00000562747 DEFB112Q30KQ8 113 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 ACSM3Q53FZ2 586 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 Q6P435 159 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 NKAIN3Q8N8D7 197 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 OR4S1Q8NGB4 309 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 S100A13Q99584 98 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 TMED9Q9BVK6 235 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 CHST6Q9GZX3 395 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 METTL9Q9H1A3 318 aa13.55□□□□□ -0.24
CDT1-202ENST00000562747 hADV38S2A0JD32 116 aa13.54□□□□□ -0.24
CDT1-202ENST00000562747 FUOMA2VDF0 154 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms