RNA–Protein interactions for RNA: ENST00000562298.1

VPS9D1-AS1-201, VPS9D1 antisense RNA 1, humanhuman

TSL 1 (best)

Gene VPS9D1-AS1, Length 931 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-201ENST00000562298 ABHD12Q8N2K0 398 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 LIN7BQ9HAP6 207 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 HMG20AQ9NP66 347 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 ENOPH1Q9UHY7 261 aa13.34□□□□□ -0.27
VPS9D1-AS1-201ENST00000562298 NOTCH3Q9UM47 2321 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR2H2O95918 312 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CYB5AP00167 134 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 AMY1AP04745 511 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 AMY2AP04746 511 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ATF1P18846 271 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CDK2P24941 298 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FASP25445 335 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ATP6V1E1P36543 226 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CDC42P60953 191 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 BDH1Q02338 343 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PDZK1IP1Q13113 114 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CCDC121Q6ZUS5 278 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 LHFPL2Q6ZUX7 228 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 UTS2BQ765I0 119 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FAM220AQ7Z4H9 259 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR8J1Q8NGP2 316 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR2G2Q8NGZ5 317 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RFT1Q96AA3 541 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FGGYQ96C11 551 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 GAL3ST2Q9H3Q3 398 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RIBC2Q9H4K1 309 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FRRS1LQ9P0K9 344 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 DPM3Q9P2X0 92 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 GSTK1Q9Y2Q3 226 aa13.33□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TRGV10A0A0A0MS01 117 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SH2D7A6NKC9 451 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ISG15P05161 165 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 LPLP06858 475 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PF4V1P10720 104 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 GLIPR1P48060 266 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 NANOS3P60323 173 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 AESQ08117 197 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TMED1Q13445 227 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ABCA11PQ4W5N1 156 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 UTF1Q5T230 341 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TMEM244Q5VVB8 128 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR52W1Q6IF63 320 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 C10orf99Q6UWK7 81 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 HEPN1Q6WQI6 88 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CENPVQ7Z7K6 275 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RTN4RL2Q86UN3 420 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR51A4Q8NGJ6 313 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ZNF596Q8TC21 504 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 BCAS4Q8TDM0 211 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CORO2AQ92828 525 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 AKR1E2Q96JD6 320 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OPALINQ96PE5 141 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SPACA5Q96QH8 159 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 MBOAT4Q96T53 435 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SLC25A33Q9BSK2 321 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ZNF286AQ9HBT8 521 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 EXOSC4Q9NPD3 245 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 GLS2Q9UI32 602 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 AP4S1Q9Y587 144 aa13.32□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 H3BUI4 141 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SH2D1BO14796 132 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 KDM4BO94953 1096 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR2F2O95006 317 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 MPIG6BO95866 241 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ZNF20P17024 532 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PRKACBP22694 351 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 LMO1P25800 156 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 BRS3P32247 399 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR5D18Q8NGL1 313 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OR10AC1Q8NH08 325 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 STMN2Q93045 179 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RFKQ969G6 155 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 MYDGFQ969H8 173 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SPSB1Q96BD6 273 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 RBM14Q96PK6 669 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 COMMD4Q9H0A8 199 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TAS2R3Q9NYW6 316 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 HHLA2Q9UM44 414 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 OAZ3Q9UMX2 235 aa13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 TSSC4Q9Y5U2 329 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 LEUTXA8MZ59 168 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 J3QRE1 110 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 K7EIL1 84 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CD34P28906 385 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 FDX2Q6P4F2 183 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 COQ2Q96H96 371 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 DNAH9Q9NYC9 4486 aa13.3□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 A0A087X0M5 115 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 A0A1B0GX30 115 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 ODAMA1E959 279 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 LY6LH3BQJ8 138 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 BUB1B-PAK6H3BSN5 160 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PF4P02776 101 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 MT-ND2P03891 347 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 CSN2P05814 226 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 PTGFRP43088 359 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 SLC35A2P78381 396 aa13.29□□□□□ -0.28
VPS9D1-AS1-201ENST00000562298 BNIP1Q12981 228 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms