RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CCBE1Q6UXH8 406 aaPredicted RBP20.42■□□□□ 0.86
NME3-202ENST00000561637 ZCCHC4Q9H5U6 513 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 FOXJ3Q9UPW0 622 aa20.42■□□□□ 0.86
NME3-202ENST00000561637 KDM4BO94953 1096 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 FADS2O95864 444 aaKnown RBP20.41■□□□□ 0.86
NME3-202ENST00000561637 OR2H2O95918 312 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 CYB5AP00167 134 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 MT-ND2P03891 347 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 OCM2P0CE71 109 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 OCMP0CE72 109 aaPredicted RBP20.41■□□□□ 0.86
NME3-202ENST00000561637 PEX2P28328 305 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 MEF2CQ06413 473 aaPredicted RBP20.41■□□□□ 0.86
NME3-202ENST00000561637 DYNC1I2Q13409 638 aaKnown RBP20.41■□□□□ 0.86
NME3-202ENST00000561637 TMEM219Q86XT9 240 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 SEBOXQ9HB31 216 aaPredicted RBP20.41■□□□□ 0.86
NME3-202ENST00000561637 NEK6Q9HC98 313 aa20.41■□□□□ 0.86
NME3-202ENST00000561637 hADV38S2A0JD32 116 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 MPZL2O60487 215 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 GDNFP39905 211 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 EFNB2P52799 333 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 P2RX3P56373 397 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 ZP1P60852 638 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 RAB40BQ12829 278 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 RYR3Q15413 4870 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 FAM189A2Q15884 450 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 SSX2Q16385 188 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 AANATQ16613 207 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 PRAMEF5Q5TYX0 476 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 C11orf44Q8N8P7 122 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 OR11H6Q8NGC7 330 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 OR13D1Q8NGV5 346 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 CNIH3Q8TBE1 160 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 Q96MT0 163 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 EXOSC4Q9NPD3 245 aaKnown RBP20.4■□□□□ 0.86
NME3-202ENST00000561637 MRPS18AQ9NVS2 196 aaKnown RBP20.4■□□□□ 0.86
NME3-202ENST00000561637 ING3Q9NXR8 418 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 FBLN5Q9UBX5 448 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 LINC00312Q9Y6C7 94 aa20.4■□□□□ 0.86
NME3-202ENST00000561637 FAM172BPA6NC97 362 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 MGST3O14880 152 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 RBP4P02753 201 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 SCN1BQ07699 218 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 HABP2Q14520 560 aaPredicted RBP20.39■□□□□ 0.85
NME3-202ENST00000561637 SPIN3Q5JUX0 258 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 UTF1Q5T230 341 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 Q6P435 159 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 OR51A2Q8NGJ7 313 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 OR5AK2Q8NH90 309 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 SESN1Q9Y6P5 492 aa20.39■□□□□ 0.85
NME3-202ENST00000561637 HCKP08631 526 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 GLIPR1P48060 266 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 SOX2P48431 317 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 ETV1P50549 477 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 LRRC36Q1X8D7 754 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 OR2G6Q5TZ20 316 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 C10orf67Q8IYJ2 551 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 OR4C13Q8NGP0 309 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 TSEN15Q8WW01 171 aaKnown RBP20.38■□□□□ 0.85
NME3-202ENST00000561637 MRPL48Q96GC5 212 aaKnown RBP20.38■□□□□ 0.85
NME3-202ENST00000561637 COMMD4Q9H0A8 199 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 INPP5EQ9NRR6 644 aa20.38■□□□□ 0.85
NME3-202ENST00000561637 SMPD3Q9NY59 655 aaPredicted RBP20.38■□□□□ 0.85
NME3-202ENST00000561637 RPL36Q9Y3U8 105 aaKnown RBP20.38■□□□□ 0.85
NME3-202ENST00000561637 SIRT4Q9Y6E7 314 aaPredicted RBP20.38■□□□□ 0.85
NME3-202ENST00000561637 IGHV2-26A0A0B4J1V2 119 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 TMEM212A6NML5 194 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 VGLL3A8MV65 326 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 GBX2P52951 348 aaPredicted RBP20.37■□□□□ 0.85
NME3-202ENST00000561637 AESQ08117 197 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 KISS1Q15726 138 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 TRAPPC6BQ86SZ2 158 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 PARP16Q8N5Y8 322 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 COQ2Q96H96 371 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 ZNF702PQ9H963 129 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 FGF20Q9NP95 211 aaPredicted RBP20.37■□□□□ 0.85
NME3-202ENST00000561637 TAS2R4Q9NYW5 299 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 DHDHQ9UQ10 334 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 TCF19Q9Y242 345 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 TBL2Q9Y4P3 447 aaKnown RBP20.37■□□□□ 0.85
NME3-202ENST00000561637 HILPDAQ9Y5L2 63 aa20.37■□□□□ 0.85
NME3-202ENST00000561637 A6NDX4 124 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 SH2D1BO14796 132 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 PIN1P1O15428 100 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 SULT1B1O43704 296 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 TMEM225BP0DP42 221 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 ZNF44P15621 663 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 KIR2DS4P43632 304 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 CDK5R1Q15078 307 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 ZSCAN26Q16670 478 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 C2orf68Q2NKX9 166 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 KLHDC1Q8N7A1 406 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 ORAI1Q96D31 301 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 TMEM133Q9H2Q1 129 aa20.36■□□□□ 0.85
NME3-202ENST00000561637 SLC33A1O00400 549 aaPredicted RBP20.35■□□□□ 0.85
NME3-202ENST00000561637 CSF1P09603 554 aa20.35■□□□□ 0.85
NME3-202ENST00000561637 CCDC159P0C7I6 412 aa20.35■□□□□ 0.85
NME3-202ENST00000561637 KPRPQ5T749 579 aaPredicted RBP20.35■□□□□ 0.85
NME3-202ENST00000561637 ZNF691Q5VV52 312 aa20.35■□□□□ 0.85
NME3-202ENST00000561637 Q6ZS46 218 aa20.35■□□□□ 0.85
NME3-202ENST00000561637 OR13C5Q8NGS8 318 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms