RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 NDFIP1Q9BT67 221 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 IGHV3-43A0A0B4J1X8 118 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 CHST1O43916 411 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 IGHV3-43DP0DP04 118 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 FAM53BQ14153 422 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 MICBQ29980 383 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 MESTQ5EB52 335 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 C19orf35Q6ZS72 473 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 FLRT3Q9NZU0 649 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 DOK5Q9P104 306 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 ZNF253O75346 499 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 ITGBL1O95965 494 aaPredicted RBP9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 CTSDP07339 412 aaPredicted RBP9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 HLA-DRB5Q30154 266 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 JMJD6Q6NYC1 403 aaPredicted RBP9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 OR5D13Q8NGL4 314 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 RFESDQ8TAC1 157 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 MCHR2Q969V1 340 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 ELSPBP1Q96BH3 223 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 DPH3P1Q9H4G8 78 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 HDGFL3Q9Y3E1 203 aa9.05□□□□□ -0.96
GTF3C1-202ENST00000561623 ITGB4P16144 1822 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 CIDEAO60543 219 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 OR2I1PQ8NGU4 316 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 APOBEC4Q8WW27 367 aaKnown RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 GHITMQ9H3K2 345 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 PARP11Q9NR21 331 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 RNF24Q9Y225 148 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ASXL3Q9C0F0 2248 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 NINQ8N4C6 2090 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 C11orf94C9JXX5 98 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 M0QZK8 103 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 GGCTO75223 188 aaKnown RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 FUT7Q11130 342 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ZNF770Q6IQ21 691 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 NPEPL1Q8NDH3 523 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 PRSS3P2Q8NHM4 247 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 POM121L2Q96KW2 1035 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 NRIP2Q9BQI9 281 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 SRD5A3Q9H8P0 318 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ICAM5Q9UMF0 924 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 CDX4O14627 284 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 HTR1DP28221 377 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 LIAT1Q6ZQX7 453 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 WDR34Q96EX3 536 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 TMEM30CPA0ZSE6 113 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 NEURL1O76050 574 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 CRYAAP02489 173 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 EWSR1Q01844 656 aaKnown RBP eCLIP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 IL24Q13007 206 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 BTNL3Q6UXE8 466 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 RFLNBQ8N5W9 214 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 OR5AU1Q8NGC0 362 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 OR8B12Q8NGG6 310 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 EDARADDQ8WWZ3 215 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 WDR13Q9H1Z4 485 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 PSG11Q9UQ72 335 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ECM29Q5VYK3 1845 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 PATE4P0C8F1 98 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 TMEM97Q5BJF2 176 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ZNF385CQ66K41 422 aaPredicted RBP9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 LYZL2Q7Z4W2 148 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 ANAPC16Q96DE5 110 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 OR2D2Q9H210 308 aa9.04□□□□□ -0.96
GTF3C1-202ENST00000561623 PLPP3O14495 311 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 EIF3GO75821 320 aaKnown RBP eCLIP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 HRASP01112 189 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 IGHV3-13P01766 116 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 IGHV3-7P01780 117 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 CCL2P13500 99 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 MMP9P14780 707 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 GNG10P50151 68 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ZNF660Q6AZW8 331 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 C16orf47Q6ZP98 133 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 OR2M7Q8NG81 312 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 STARD4Q96DR4 205 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 MRGPRX1Q96LB2 322 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 FSCN3Q9NQT6 498 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 MBD1Q9UIS9 605 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 MNX1P50219 401 aaPredicted RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 PPOXP50336 477 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 SKP2Q13309 424 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 ELOBQ15370 118 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 DHRS11Q6UWP2 260 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 OR11H4Q8NGC9 324 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 TBX15Q96SF7 602 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 PITPNC1Q9UKF7 332 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 KLK13Q9UKR3 277 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 KIAA1551Q9HCM1 1747 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 NGFP01138 241 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 C21orf58P58505 322 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 C1QL3Q5VWW1 255 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 TMEM230Q96A57 120 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 HES4Q9HCC6 221 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 DNAJC13O75165 2243 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 TPRP12270 2363 aaKnown RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 MRPL54Q6P161 138 aaKnown RBP9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 OR10AD1Q8NGE0 317 aa9.03□□□□□ -0.96
GTF3C1-202ENST00000561623 CA6P23280 308 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms