RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 RENP00797 406 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 IGHV4-59P01825 116 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NCK1P16333 377 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 PAICSP22234 425 aaKnown RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 PSMB9P28065 219 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 RPS19P39019 145 aaKnown RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 SMIM11AP58511 58 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NCS1P62166 190 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 SLC35A2P78381 396 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 TAF9Q16594 264 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 TATDN3Q17R31 274 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 C4orf48Q5BLP8 95 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 GLYATL3Q5SZD4 288 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 HACD4Q5VWC8 232 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 CFAP161Q6P656 301 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 TMPRSS11AQ6ZMR5 421 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 Q6ZSV7 163 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 WDR86Q86TI4 376 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 C11orf53Q8IXP5 236 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 UXS1Q8NBZ7 420 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 BVESQ8NE79 360 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 OR56B2PQ8NGI1 322 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 OR2AJ1Q8NGZ0 328 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 OR4K13Q8NH42 304 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 C8orf46Q8TAG6 207 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NPRL2Q8WTW4 380 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 TCTEX1D2Q8WW35 142 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 SPTSSAQ969W0 71 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 FAM162AQ96A26 154 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NARS2Q96I59 477 aaKnown RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 NSMCE2Q96MF7 247 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 PFDN5Q99471 154 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 MARVELD1Q9BSK0 173 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 SRA1Q9HD15 236 aaKnown RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 ACOT13Q9NPJ3 140 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NUDT15Q9NV35 164 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 RBFOX1Q9NWB1 397 aaKnown RBP6.91□□□□□ -1.3
PALB2-202ENST00000561514 FAM118AQ9NWS6 357 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 ZNRD1Q9P1U0 126 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 GAB2Q9UQC2 676 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NUBP2Q9Y5Y2 271 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 NOTCH3Q9UM47 2321 aa6.91□□□□□ -1.3
PALB2-202ENST00000561514 PRSS47A8MTI9 375 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 DVL1O14640 695 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 XRCC2O43543 280 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 OR10H3O60404 316 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 DIRAS1O95057 198 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 TSPAN15O95858 294 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 MBP02144 154 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 ACAA1P09110 424 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 MUC1P15941 1255 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 PVALBP20472 110 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 GPX4P36969 197 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 TGFBR2P37173 567 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 MAP2K3P46734 347 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 HMGA2P52926 109 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 ISL1P61371 349 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 MZT1Q08AG7 82 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 TSPAN31Q12999 210 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 NHLRC3Q5JS37 347 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 KPRPQ5T749 579 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 ATPAF1Q5TC12 328 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 SFRP4Q6FHJ7 346 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 C1orf122Q6ZSJ8 110 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 PRSS45Q7RTY3 260 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 REC114Q7Z4M0 266 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 ZDHHC21Q8IVQ6 265 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 SDR9C7Q8NEX9 313 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 OR4C15Q8NGM1 316 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 OR52J3Q8NH60 311 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 OR2AE1Q8NHA4 323 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 GLYATL2Q8WU03 294 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 ZNRF4Q8WWF5 429 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 TNFRSF14Q92956 283 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 LINC00052Q96N35 136 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 IFT27Q9BW83 186 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 NMNAT2Q9BZQ4 307 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 NKX6-2Q9C056 277 aaPredicted RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 SRRQ9GZT4 340 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 DPAGT1Q9H3H5 408 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 HEXA-AS1Q9H8Q6 139 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 CNTD2Q9H8S5 307 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 C14orf119Q9NWQ9 140 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 C1orf123Q9NWV4 160 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 METTL1Q9UBP6 276 aaKnown RBP6.9□□□□□ -1.3
PALB2-202ENST00000561514 MAGEL2Q9UJ55 1249 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 VPREB3Q9UKI3 123 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 CDH10Q9Y6N8 788 aa6.9□□□□□ -1.3
PALB2-202ENST00000561514 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.89□□□□□ -1.31
PALB2-202ENST00000561514 hCG_38984A0A1B0GV85 526 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 C9orf170A2RU37 121 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 RFPL4AA6NLU0 287 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 NUDT19A8MXV4 375 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 RFPL4AL1F8VTS6 287 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 AKR7A2O43488 359 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 EIF3GO75821 320 aaKnown RBP eCLIP6.89□□□□□ -1.31
PALB2-202ENST00000561514 SC5DO75845 299 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 GADD45GO95257 159 aa6.89□□□□□ -1.31
PALB2-202ENST00000561514 RAB3DO95716 219 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms