RNA–Protein interactions for RNA: ENST00000561242.1

TPM1-229, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 673 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-229ENST00000561242 PRRC2AP48634 2157 aaKnown RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 ASH1LQ9NR48 2969 aaKnown RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 IGKV1D-17A0A075B6S4 117 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 MEIKINA0A087WXM9 373 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 SMIM31A0A1B0GVY4 71 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 NOTOA8MTQ0 251 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 M0R1W7 72 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 SLC17A2O00624 439 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 TOR1AO14656 332 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 SFTPBP07988 381 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 ZFP36P26651 326 aaKnown RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 FGF9P31371 208 aaPredicted RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 SOX6P35712 828 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 CEBPDP49716 269 aaPredicted RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 ARHGDIBP52566 201 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 ERVFRD-1P60508 538 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 ZP1P60852 638 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 SEC61A1P61619 476 aaKnown RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 MXD1Q05195 221 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 P2RY14Q15391 338 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 NKAPLQ5M9Q1 402 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 FAM27D1Q5T7N8 215 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 HES5Q5TA89 166 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 ZNF529Q6P280 563 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 OR2W3Q7Z3T1 314 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 CD177Q8N6Q3 437 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 OR56B1Q8NGI3 324 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 OR13D1Q8NGV5 346 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 FAM46BQ96A09 425 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 WDFY2Q96P53 400 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 DCTN5Q9BTE1 182 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 CHST6Q9GZX3 395 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 BANF2Q9H503 90 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 METTL8Q9H825 291 aaKnown RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 ETAA1Q9NY74 926 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 TRAPPC2LQ9UL33 140 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 POLR3KQ9Y2Y1 108 aaPredicted RBP8.9□□□□□ -0.98
TPM1-229ENST00000561242 PEX16Q9Y5Y5 336 aa8.9□□□□□ -0.98
TPM1-229ENST00000561242 CREBBPQ92793 2442 aa8.9□□□□□ -0.99
TPM1-229ENST00000561242 A0A096LNT2 108 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 TMEM30CPA0ZSE6 113 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A10PA6NDY2 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A18PA6NE21 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A16PA6NEW6 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A20PA6NIJ5 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A8PA6NJQ4 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A7PA6NKC0 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A22PA8MWA6 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A12PA8MX19 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A5PA8MXJ8 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A23PA8MXZ1 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 PIN1P1O15428 100 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 TMEM127O75204 238 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 CA11O75493 328 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A15PP0C7V4 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A13PP0C7W8 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A14PP0C7W9 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM90A24PP0C7X0 464 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 JUNBP17275 347 aaPredicted RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 GZMHP20718 246 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FUT3P21217 361 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 RBM11P57052 281 aaKnown RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 LSM3P62310 102 aaKnown RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 DYNC1I2Q13409 638 aaKnown RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 INSL4Q14641 139 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 SSX1Q16384 188 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 TAF9Q16594 264 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 IDNKQ5T6J7 187 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 MZT2AQ6P582 158 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 TMEM91Q6ZNR0 172 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 LRRTM1Q86UE6 522 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 KIR3DL3Q8N743 410 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 SETD6Q8TBK2 473 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 AP3S1Q92572 193 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 FAM3DQ96BQ1 224 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 ZNF714Q96N38 554 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 CENPOQ9BU64 300 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 DPCDQ9BVM2 203 aaPredicted RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 SUCNR1Q9BXA5 334 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 OR51E2Q9H255 320 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 PPA2Q9H2U2 334 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 ABRACLQ9P1F3 81 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 CTSZQ9UBR2 303 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 DAPK2Q9UIK4 370 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 NUP50Q9UKX7 468 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 MAB21L2Q9Y586 359 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 RAI1Q7Z5J4 1906 aaPredicted RBP8.89□□□□□ -0.99
TPM1-229ENST00000561242 ADGRG4Q8IZF6 3080 aa8.89□□□□□ -0.99
TPM1-229ENST00000561242 UNC79Q9P2D8 2635 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 SPG11Q96JI7 2443 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 A0A0G2JK05 382 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 IFITM5A6NNB3 132 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 SPINT2O43291 252 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 CRLF1O75462 422 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 GLAP06280 429 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 LPLP06858 475 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 FAM157CP0CG43 387 aa8.88□□□□□ -0.99
TPM1-229ENST00000561242 ERP29P30040 261 aaKnown RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 BLVRBP30043 206 aaPredicted RBP8.88□□□□□ -0.99
TPM1-229ENST00000561242 GLP1RP43220 463 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms