RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 Q8N7P7 452 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 OR51T1Q8NGJ9 327 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 OR10K1Q8NGX5 313 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 PHYHIPQ92561 330 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 TMEM203Q969S6 136 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 SNX22Q96L94 193 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 PCGF1Q9BSM1 259 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 EXOSC4Q9NPD3 245 aaKnown RBP12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 NUP50Q9UKX7 468 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 LRRC42Q9Y546 428 aa12.75□□□□□ -0.37
RABGGTA-219ENST00000560871 RGS9O75916 674 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 TOX4O94842 621 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 CDRT1O95170 752 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 LMO1P25800 156 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 OR3A1P47881 315 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 FABP5Q01469 135 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 IL13RA2Q14627 380 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 HSD17B12Q53GQ0 312 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 NHLRC3Q5JS37 347 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 TCF23Q7RTU1 214 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 CEACAM19Q7Z692 300 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 OR4D6Q8NGJ1 314 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF418Q8TF45 676 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 C1orf147Q96MC9 270 aaPredicted RBP12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 CHST6Q9GZX3 395 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 NDUFB11Q9NX14 153 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
RABGGTA-219ENST00000560871 WNK2Q9Y3S1 2297 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 A0A1W2PQ09 198 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 M0R1W7 72 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 SIRPB1O00241 398 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF273Q14593 569 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 RSU1Q15404 277 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 CD200R1LQ6Q8B3 271 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 C9orf139Q6ZV77 190 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 USP43Q70EL4 1123 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 VMO1Q7Z5L0 202 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 FAM185AQ8N0U4 392 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 JAGN1Q8N5M9 183 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 OR4S1Q8NGB4 309 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 ZFAND2BQ8WV99 257 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 FCGR1BQ92637 280 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 MUL1Q969V5 352 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 METTL9Q9H1A3 318 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 TCF7L1Q9HCS4 588 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF69Q9UC07 566 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 GLS2Q9UI32 602 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 DOCK11Q5JSL3 2073 aa12.73□□□□□ -0.37
RABGGTA-219ENST00000560871 IGHV3OR16-10A0A075B7F0 116 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 A0A1W2PP11 408 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 MEGF11A6BM72 1044 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 SH2D1BO14796 132 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 CD37P11049 281 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 SRMP19623 302 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 GABRR1P24046 479 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 RPL31P62899 125 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 PDCD1Q15116 288 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 GRK1Q15835 563 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 PIGYQ3MUY2 71 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 CHST4Q8NCG5 386 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 OR4M1Q8NGD0 313 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 TBC1D15Q8TC07 691 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 TNFRSF14Q92956 283 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 SLC6A7Q99884 636 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 UQCC2Q9BRT2 126 aa12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 UNKLQ9H9P5 680 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 MRPS28Q9Y2Q9 187 aaKnown RBP12.72□□□□□ -0.37
RABGGTA-219ENST00000560871 A0A0G2JK05 382 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 CENPVL3A0A0U1RRI6 287 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 SLC33A1O00400 549 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 CCRL2O00421 344 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 MGST3O14880 152 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF780AO75290 641 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 HTR3BO95264 441 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 CSN2P05814 226 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF44P15621 663 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 CCL3L1P16619 93 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 SERPINA2P20848 420 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 PSMB9P28065 219 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 DLX1P56177 255 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 DLX6P56179 175 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 RBM11P57052 281 aaKnown RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 HILS1P60008 231 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 TMEM200BQ69YZ2 307 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 AWAT2Q6E213 333 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 METAP1DQ6UB28 335 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 GLIPR1L1Q6UWM5 242 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 C1orf122Q6ZSJ8 110 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 GDPD3Q7L5L3 318 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 CMTM4Q8IZR5 234 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 OSR2Q8N2R0 312 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 C11orf42Q8N5U0 333 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 OR5D13Q8NGL4 314 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 PPP1R35Q8TAP8 253 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 C22orf15Q8WYQ4 148 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF48Q96MX3 618 aaPredicted RBP12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 GFI1Q99684 422 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 SIRT7Q9NRC8 400 aa12.71□□□□□ -0.37
RABGGTA-219ENST00000560871 ZNF581Q9P0T4 197 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms