RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 MOV10Q9HCE1 1003 aaKnown RBP4.67□□□□□ -1.66
VPS13C-209ENST00000560637 PRR13Q9NZ81 148 aa4.67□□□□□ -1.66
VPS13C-209ENST00000560637 RNF7Q9UBF6 113 aa4.67□□□□□ -1.66
VPS13C-209ENST00000560637 CLN8Q9UBY8 286 aa4.67□□□□□ -1.66
VPS13C-209ENST00000560637 ATMQ13315 3056 aa4.67□□□□□ -1.66
VPS13C-209ENST00000560637 IGHV3-72A0A0B4J1Y9 119 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 HLA-AP01891 365 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ANXA7P20073 488 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 FUT3P21217 361 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ARF6P62330 175 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 IL13RA1P78552 427 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LRRC10Q5BKY1 277 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 Q71RC1 249 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 DPPA2Q7Z7J5 298 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CMTM1Q8IZ96 169 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LYG1Q8N1E2 194 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 OR10J5Q8NHC4 309 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CLCC1Q96S66 551 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CCL19Q99731 98 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 SEC22CQ9BRL7 303 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LINC00470Q9BZP3 86 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 SLIRPQ9GZT3 109 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 HRASLSQ9HDD0 168 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PLSCR4Q9NRQ2 329 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CCDC59Q9P031 241 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 MGAT4CQ9UBM8 478 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 DKK4Q9UBT3 224 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ZNF221Q9UK13 617 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LSM2Q9Y333 95 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 FAM96BQ9Y3D0 163 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LSM5Q9Y4Y9 91 aaKnown RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 MPC1Q9Y5U8 109 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ZSCAN5BA6NJL1 495 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 UPK1BO75841 260 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CRHP06850 196 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 OR5H8P0DN80 308 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 GNB1P62873 340 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 SLC25A30Q5SVS4 291 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 C1QTNF12Q5T7M4 302 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CLEC2AQ6UVW9 174 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 FAM216BQ8N7L0 139 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 GDPD1Q8N9F7 314 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 DMBX1Q8NFW5 382 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 OR8G5Q8NG78 346 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 C15orf40Q8WUR7 153 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 SLX1AQ9BQ83 275 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 DCAF16Q9NXF7 216 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PSG11Q9UQ72 335 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PPIAL4EA0A075B759 164 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 IGKV3D-15A0A087WSY6 115 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 MEIOCA2RUB1 952 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 OR5B21A6NL26 309 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PPIAL4DF5H284 164 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 J3QKU1 62 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 L7N2F9 121 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CTAG2O75638 210 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 HAND1O96004 215 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 IGHMP01871 453 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 CHRM2P08172 466 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PPIAL4FP0DN26 164 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 RCC1P18754 421 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 FGF9P31371 208 aaPredicted RBP4.66□□□□□ -1.66
VPS13C-209ENST00000560637 GLRXP35754 106 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 EVX1P49640 407 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 TAS2R19P59542 299 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 VAMP2P63027 116 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ESCO2Q56NI9 601 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 TMEM255AQ5JRV8 349 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 BTNL3Q6UXE8 466 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 C5orf24Q7Z6I8 188 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 ZNF695Q8IW36 515 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 LILRB4Q8NHJ6 448 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 MARCH1Q8TCQ1 289 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 TCTEX1D2Q8WW35 142 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PHYHIPQ92561 330 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 KIRREL1Q96J84 757 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 NPAP1Q9NZP6 1156 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 PPIAL4AQ9Y536 164 aa4.66□□□□□ -1.66
VPS13C-209ENST00000560637 DCHS1Q96JQ0 3298 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 TRGV10A0A0A0MS01 117 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 J3QT63 122 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 CEACAM4O75871 244 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 HEXAP06865 529 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 UBBP0CG47 229 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 CAV2P51636 162 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 LCN2P80188 198 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 COL10A1Q03692 680 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 SP5Q6BEB4 398 aaPredicted RBP4.65□□□□□ -1.66
VPS13C-209ENST00000560637 IGF2-ASQ6U949 168 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 BAIAP2L2Q6UXY1 529 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 SEM1Q6ZVN7 128 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 SPERTQ8NA61 448 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 OR2AK2Q8NG84 335 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 KCTD12Q96CX2 325 aaKnown RBP4.65□□□□□ -1.66
VPS13C-209ENST00000560637 LYZL4Q96KX0 146 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 ISYNA1Q9NPH2 558 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 C12orf4Q9NQ89 552 aa4.65□□□□□ -1.66
VPS13C-209ENST00000560637 ZNF106Q9H2Y7 1883 aaKnown RBP4.65□□□□□ -1.66
VPS13C-209ENST00000560637 LRP5LA4QPB2 252 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms