RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 NUP205Q92621 2012 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 A0A1W2PQD3 144 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 CDC42EP2O14613 210 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 CA11O75493 328 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 MRPS11P82912 194 aaKnown RBP11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR10A7Q8NGE5 316 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR5M9Q8NGP3 310 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 A0A1B0GTH9 108 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 PGA5P0DJD9 388 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 RPL30P62888 115 aaKnown RBP11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 TUSC1Q2TAM9 212 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 HLA-DRB5Q30154 266 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 SEZ6L2Q6UXD5 910 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 Q6ZN92 141 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 AMER3Q8N944 861 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 PCDHGA9Q9Y5G4 932 aaKnown RBP11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 NINQ8N4C6 2090 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 GZMHP20718 246 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 HERVK_113P61574 105 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZIC1Q15915 447 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 VN1R4Q7Z5H5 301 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 TGIF2LXQ8IUE1 241 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 STXBP6Q8NFX7 210 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 BLNKQ8WV28 456 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 TM4SF19Q96DZ7 209 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 OPN4Q9UHM6 478 aa11.69□□□□□ -0.54
CSPG4P11-201ENST00000560634 K7EQS6 105 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 M0R2Z0 102 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR4A8P0C604 315 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 PPOXP50336 477 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 RIGQ13278 110 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 FDX2Q6P4F2 183 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC25A42Q86VD7 318 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 C5orf17Q8NAS9 161 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 LIPGQ9Y5X9 500 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGHV5-51A0A0C4DH38 117 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 DYNLT3P51808 116 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 MRGPRGQ86SM5 289 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 GVQW1Q8N7I0 195 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 A0A087X0M5 115 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 A0A1B0GX30 115 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 IGSF23A1L1A6 192 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 C11orf94C9JXX5 98 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 DOLPP1Q86YN1 238 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZBTB34Q8NCN2 500 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 MRGPRDQ8TDS7 321 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 RAB1CQ92928 201 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 MOGAT1Q96PD6 335 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 PLA2G3Q9NZ20 509 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 C2CD4DB7Z1M9 353 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 CYR61O00622 381 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 LILRA6Q6PI73 481 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 TBC1D26Q86UD7 250 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 R3HDM4Q96D70 268 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 PERPQ96FX8 193 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 SRD5A3Q9H8P0 318 aa11.68□□□□□ -0.54
CSPG4P11-201ENST00000560634 SPAG17Q6Q759 2223 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 C7orf77A4D0Y5 90 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 ORM2P19652 201 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 MPV17LQ2QL34 196 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 CBLN3Q6UW01 205 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR8B12Q8NGG6 310 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 TRAV38-1A0A0B4J264 116 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 CHST1O43916 411 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SEMA7AO75326 666 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SELENOPP49908 381 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 ERVS71-1P61550 626 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 ZXDAP98168 799 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 TMEM211Q6ICI0 200 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 NPAS1Q99742 590 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SMDT1Q9H4I9 107 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 OOEPA6NGQ2 149 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 MT-CO3P00414 261 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 GALNSP34059 522 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 FGF8P55075 233 aaPredicted RBP11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC35E3Q7Z769 313 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 DTD1Q8TEA8 209 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 PTP4A1Q93096 173 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 TMEM208Q9BTX3 173 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 C1RLQ9NZP8 487 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 WASHC3Q9Y3C0 194 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 HAND1O96004 215 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SEC11BP0C7V7 166 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SULT1A1P50225 295 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 RHBDD2Q6NTF9 364 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 LIMS2Q7Z4I7 341 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 ASB10Q8WXI3 467 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 ALG14Q96F25 216 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 SLC25A33Q9BSK2 321 aa11.67□□□□□ -0.54
CSPG4P11-201ENST00000560634 C4AP0C0L4 1744 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 PDE6DO43924 150 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 ITGBL1O95965 494 aaPredicted RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 CTGFP29279 349 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 BRS3P32247 399 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 RP1P56715 2156 aa11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 RPL24P83731 157 aaKnown RBP11.66□□□□□ -0.54
CSPG4P11-201ENST00000560634 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms