RNA–Protein interactions for RNA: ENST00000560448.5

PKNOX1-209, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 5

Gene PKNOX1, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-209ENST00000560448 DOCK11Q5JSL3 2073 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 TRAV8-7A0A075B6U6 113 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 ZNF780AO75290 641 aaPredicted RBP11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 KDM4BO94953 1096 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 EIF4EP06730 217 aaKnown RBP11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 PSG2P11465 335 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 POU3F4P49335 361 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 CR1LQ2VPA4 569 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 TRIM16LQ309B1 348 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 ASPHD2Q6ICH7 369 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 LYPD2Q6UXB3 125 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 C19orf18Q8NEA5 215 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 OR5H6Q8NGV6 325 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 RAB40AQ8WXH6 277 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 MRI1Q9BV20 369 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM234AQ9H0X4 552 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 LPAR2Q9HBW0 351 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 MTCH1Q9NZJ7 389 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 CTSZQ9UBR2 303 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 ZNF222Q9UK12 451 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 ZANQ9Y493 2812 aa11.63□□□□□ -0.55
PKNOX1-209ENST00000560448 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 LOC105371242A0A075B767 164 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 KIR2DS1A0A191URI9 304 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 IFITM5A6NNB3 132 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 AIPO00170 330 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 DVL1O14640 695 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 PAHP00439 452 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 CD37P11049 281 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 IL7P13232 177 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 ZFP36P26651 326 aaKnown RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 ZNF93P35789 620 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 ZP1P60852 638 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 ZNF146Q15072 292 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM120AOSQ5T036 256 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 FAHD2BQ6P2I3 314 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 Q71RC1 249 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 DACT3Q96B18 629 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 FOXRED1Q96CU9 486 aaPredicted RBP11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 FAHD2AQ96GK7 314 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 CMTM3Q96MX0 182 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 GPER1Q99527 375 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 BEX2Q9BXY8 128 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 TCF7L1Q9HCS4 588 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 TBC1D24Q9ULP9 559 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 SPATA2Q9UM82 520 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 INSIG2Q9Y5U4 225 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 V9GY05 133 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 TLN2Q9Y4G6 2542 aa11.62□□□□□ -0.55
PKNOX1-209ENST00000560448 hCG_2014768A0A024R1R8 64 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 IGKV1D-17A0A075B6S4 117 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 IGHV3OR15-7A0A075B7D8 119 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 TRBV23-1A0A0A0MS06 115 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 A0A0B4J203 849 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 RFPL4AA6NLU0 287 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 RFPL4AL1F8VTS6 287 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 PHF1O43189 567 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 CHRM2P08172 466 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SNRPBP14678 240 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 CFPP27918 469 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SEC61A1P61619 476 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 PAX2Q02962 417 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 GPR176Q14439 515 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 P2RY14Q15391 338 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 ELP2Q6IA86 826 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 OR8H2Q8N162 312 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM58AQ8N1B3 248 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SAMD12Q8N8I0 201 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 POC5Q8NA72 575 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 OR4M1Q8NGD0 313 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 C8orf46Q8TAG6 207 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 EMG1Q92979 244 aaKnown RBP11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SLAMF9Q96A28 289 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 GAFA1Q96PS6 74 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 S100A13Q99584 98 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 CCL13Q99616 98 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 UQCC2Q9BRT2 126 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SLITRK2Q9H156 845 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 IL36GQ9NZH8 169 aa11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 SLC25A10Q9UBX3 287 aaPredicted RBP11.61□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM25AB3EWG3 89 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM25CB3EWG5 89 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM25GB3EWG6 89 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 PTTG1O95997 202 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 PLATP00750 562 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 HLA-DQB1P01920 261 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 APOA1P02647 267 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 FAM157CP0CG43 387 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 TMEM225BP0DP42 221 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 PRDX2P32119 198 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 RBMXP38159 391 aaKnown RBP11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 GABRA2P47869 451 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 PAX8Q06710 450 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 PYDC2Q56P42 97 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 ASCL4Q6XD76 172 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 CHST4Q8NCG5 386 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 Q8NFD4 153 aa11.6□□□□□ -0.55
PKNOX1-209ENST00000560448 OR52N4Q8NGI2 321 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms