RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 ZNF404Q494X3 552 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 SPANXN3Q5MJ09 141 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 TPTE2P1Q5T6R2 138 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 FAM27D1Q5T7N8 215 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 TMEM215Q68D42 235 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 RPL22L1Q6P5R6 122 aaKnown RBP3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 TMEM64Q6YI46 380 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 COX8CQ7Z4L0 72 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 BEST3Q8N1M1 668 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR51A2Q8NGJ7 313 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR10G7Q8NGN6 311 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR4F5Q8NH21 305 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR4C3Q8NH37 302 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR5W2Q8NH69 310 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OLIG1Q8TAK6 271 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 THEM6Q8WUY1 208 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR5P3Q8WZ94 311 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 PTX4Q96A99 478 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 ZMYND19Q96E35 227 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 BTN2A3PQ96KV6 586 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 LINC00052Q96N35 136 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 NEDD4LQ96PU5 975 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 TBX15Q96SF7 602 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 MGLLQ99685 303 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 NKX3-1Q99801 234 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 RARRES2Q99969 163 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 PLA2G12BQ9BX93 195 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 REG4Q9BYZ8 158 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 ZNF665Q9H7R5 613 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 MOB1AQ9H8S9 216 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 ELL3Q9HB65 397 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 C3orf14Q9HBI5 128 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 POPDC3Q9HBV1 291 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 SMCO4Q9NRQ5 59 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 FLRT3Q9NZU0 649 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 SLC23A2Q9UGH3 650 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 KLHDC2Q9Y2U9 406 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OARD1Q9Y530 152 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR1A2Q9Y585 309 aa3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 SPIN1Q9Y657 262 aaPredicted RBP3.81□□□□□ -1.8
HMGB3P26-201ENST00000560051 MLH3Q9UHC1 1453 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 NPHP4O75161 1426 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 RIC1Q4ADV7 1423 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CASKIN1Q8WXD9 1431 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CACNA1FO60840 1977 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 IGHV2OR16-5A0A0B4J2B6 119 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 WDR27A2RRH5 827 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 ZNF726A6NNF4 738 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 FABP5P3A8MUU1 101 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PRR32B1ATL7 298 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 ZNF814B7Z6K7 855 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PDCD5O14737 125 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 ARPC2O15144 300 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TBL1XO60907 577 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 KBTBD11O94819 623 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 NDUFC2O95298 119 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CA1P00915 261 aaPredicted RBP3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 FGF1P05230 155 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 SP1P08047 785 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 FAM106CPP0CH98 169 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TFPIP10646 304 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CD59P13987 128 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PVRP15151 417 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 ATF1P18846 271 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 GPX3P22352 226 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 SRIP30626 198 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 GAS1P54826 345 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 WDR5P61964 334 aaKnown RBP3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PPP1CBP62140 327 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 RPL18AQ02543 176 aaKnown RBP3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 RAB40BQ12829 278 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CRHR2Q13324 411 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 HERPUD1Q15011 391 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PEA15Q15121 130 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 SRSF7Q16629 238 aaKnown RBP eCLIP3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 CCL15Q16663 113 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 IQCJQ1A5X6 159 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 KRTAP15-1Q3LI76 137 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 FAM106AQ4KMX7 169 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PLPP4Q5VZY2 271 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 KDM4DQ6B0I6 523 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 SFXN4Q6P4A7 337 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 GOLT1AQ6ZVE7 132 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 GLCCI1Q86VQ1 547 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TMEM219Q86XT9 240 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TGIF2LYQ8IUE0 185 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR8I2Q8N0Y5 310 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TMEM86BQ8N661 226 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 MDS2Q8NDY4 140 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR4K5Q8NGD3 323 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR51T1Q8NGJ9 327 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 OR1L1Q8NH94 360 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 MFSD8Q8NHS3 518 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 TMEM106AQ96A25 262 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 PHYHIPLQ96FC7 376 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 KAZALD1Q96I82 304 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 ZNF681Q96N22 645 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 IL17FQ96PD4 163 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 F2RL3Q96RI0 385 aa3.8□□□□□ -1.8
HMGB3P26-201ENST00000560051 MCHR1Q99705 422 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms