RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 HOXC12P31275 282 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 HAAOP46952 286 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 NPY4RP50391 375 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 GPM6AP51674 278 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 OR8H1Q8NGG4 311 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 OR5P3Q8WZ94 311 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 SULT4A1Q9BR01 284 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 ANXA10Q9UJ72 324 aa15.22■□□□□ 0.03
SNX1-208ENST00000559844 L7N2F9 121 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 COX5AP20674 150 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 FUT3P21217 361 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 VAMP1P23763 118 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 FGL1Q08830 312 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 NHLRC3Q5JS37 347 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 LY6G6FQ5SQ64 297 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 BEND4Q6ZU67 534 aa15.21■□□□□ 0.03
SNX1-208ENST00000559844 FGF23Q9GZV9 251 aaPredicted RBP15.21■□□□□ 0.03
SNX1-208ENST00000559844 SDCBPO00560 298 aaPredicted RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 LYZL6O75951 148 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 FCGR3AP08637 254 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 PPP3CBP16298 524 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 FGF12P61328 243 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 SEC61A1P61619 476 aaKnown RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 CDSNQ15517 529 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 ZNF474Q6S9Z5 364 aaPredicted RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 FBXW12Q6X9E4 464 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 ITLN2Q8WWU7 325 aaPredicted RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 ELMOD3Q96FG2 381 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 WDR89Q96FK6 387 aaPredicted RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 HDHD3Q9BSH5 251 aaPredicted RBP15.2■□□□□ 0.02
SNX1-208ENST00000559844 C5orf66Q9H5L9 145 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 HEXA-AS1Q9H8Q6 139 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 NECAP2Q9NVZ3 263 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 CRIM1Q9NZV1 1036 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 JKAMPQ9P055 326 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 A8MXE2 369 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 TRAPPC2LH3BP13 241 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 M0R233 179 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 SMPD2O60906 423 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 AGFG2O95081 481 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 CD8AP01732 235 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 BCL3P20749 454 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 GNG3P63215 75 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 AADACL3Q5VUY0 350 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 TEX261Q6UWH6 196 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 ZNF573Q86YE8 665 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 SLAMF9Q96A28 289 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 PLK3Q9H4B4 646 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 U3KQ87 197 aa15.2■□□□□ 0.02
SNX1-208ENST00000559844 A0A0B4J2A0 478 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 NKX2-6A6NCS4 301 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 RFPL4AA6NLU0 287 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 RFPL4AL1F8VTS6 287 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 SFT2D2O95562 160 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 CBR1P16152 277 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 SSTR2P30874 369 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 NPBWR2P48146 333 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 IDH3GP51553 393 aaPredicted RBP15.19■□□□□ 0.02
SNX1-208ENST00000559844 ZNF808Q8N4W9 903 aaPredicted RBP15.19■□□□□ 0.02
SNX1-208ENST00000559844 CASTOR1Q8WTX7 329 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 PDCD10Q9BUL8 212 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 OR51B6Q9H340 312 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 SHPKQ9UHJ6 478 aa15.19■□□□□ 0.02
SNX1-208ENST00000559844 IGKV1D-8A0A087WSZ0 117 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 OR7C1O76099 320 aaPredicted RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 HTR2BP41595 481 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 PPP1CBP62140 327 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 OPCMLQ14982 345 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 MPV17LQ2QL34 196 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 LINC00596Q86U02 117 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 C17orf78Q8N4C9 275 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 BHLHE23Q8NDY6 225 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 TMEM230Q96A57 120 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 DHRS9Q9BPW9 319 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 PKIBQ9C010 78 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 ZNF442Q9H7R0 627 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 ZNF286AQ9HBT8 521 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 C12orf4Q9NQ89 552 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 COMMD9Q9P000 198 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 ZNF581Q9P0T4 197 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 C14orf166Q9Y224 244 aaKnown RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 USP9XQ93008 2570 aaPredicted RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 HCFC1P51610 2035 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 FXYD6-FXYD2A0A087WZ82 144 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 OR5H14A6NHG9 310 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 IFNA7P01567 189 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 SELEP16581 610 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 CXCL2P19875 107 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 AGAP20933 346 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 IL32P24001 234 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 ASCL1P50553 236 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 OR2T2Q6IF00 324 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 CXorf67Q86X51 503 aaPredicted RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 COQ8AQ8NI60 647 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 RTBDNQ9BSG5 229 aaPredicted RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 DPCDQ9BVM2 203 aaPredicted RBP15.18■□□□□ 0.02
SNX1-208ENST00000559844 FXYD6Q9H0Q3 95 aa15.18■□□□□ 0.02
SNX1-208ENST00000559844 RTTNQ86VV8 2226 aa15.17■□□□□ 0.02
SNX1-208ENST00000559844 CELA3BP08861 270 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms