RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 PYDC1Q8WXC3 89 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 CPNE2Q96FN4 548 aaPredicted RBP9.89□□□□□ -0.83
SPG11-219ENST00000559822 AKR1E2Q96JD6 320 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 HMG20AQ9NP66 347 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 IL36RNQ9UBH0 155 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 HILPDAQ9Y5L2 63 aa9.89□□□□□ -0.83
SPG11-219ENST00000559822 J3QLW9 94 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 J3QRE1 110 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 SIRPB1O00241 398 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 EI24O14681 340 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 PSPNO60542 156 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 MT-ND2P03891 347 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 ZNF19P17023 458 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 HTR1DP28221 377 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 DUSP1P28562 367 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 BRS3P32247 399 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 VDAC2P45880 294 aaPredicted RBP9.88□□□□□ -0.83
SPG11-219ENST00000559822 OR3A1P47881 315 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 ALDH3A2P51648 485 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 SNU13P55769 128 aaKnown RBP9.88□□□□□ -0.83
SPG11-219ENST00000559822 CCBE1Q6UXH8 406 aaPredicted RBP9.88□□□□□ -0.83
SPG11-219ENST00000559822 C16orf82Q7Z2V1 217 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 NDUFA11Q86Y39 141 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 C10orf67Q8IYJ2 551 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 SAXO1Q8IYX7 474 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 CHST4Q8NCG5 386 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 OR4F17Q8NGA8 305 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 ZNF596Q8TC21 504 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 RNF166Q96A37 237 aaPredicted RBP9.88□□□□□ -0.83
SPG11-219ENST00000559822 CREB3L1Q96BA8 519 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 OR4F4Q96R69 305 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 COMMD4Q9H0A8 199 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 SERTAD4Q9NUC0 356 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 TAS2R3Q9NYW6 316 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.88□□□□□ -0.83
SPG11-219ENST00000559822 GSTK1Q9Y2Q3 226 aa9.88□□□□□ -0.83
SPG11-219ENST00000559822 MPZL2O60487 215 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 KDM4BO94953 1096 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 OR2H2O95918 312 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 CSN2P05814 226 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 ZNF44P15621 663 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 CEACAM3P40198 252 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 NANOS3P60323 173 aaKnown RBP9.87□□□□□ -0.83
SPG11-219ENST00000559822 ALKBH1Q13686 389 aaKnown RBP9.87□□□□□ -0.83
SPG11-219ENST00000559822 HABP2Q14520 560 aaPredicted RBP9.87□□□□□ -0.83
SPG11-219ENST00000559822 KPNB1Q14974 876 aaKnown RBP9.87□□□□□ -0.83
SPG11-219ENST00000559822 BEAN1Q3B7T3 259 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 NSUN5P1Q3KNT7 163 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 LDLRAD2Q5SZI1 272 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 HEPN1Q6WQI6 88 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 REC114Q7Z4M0 266 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 SYS1Q8N2H4 156 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 OR5D14Q8NGL3 314 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 OR13C9Q8NGT0 318 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 HAVCR2Q8TDQ0 301 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 RFT1Q96AA3 541 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 PELI1Q96FA3 418 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 C4orf36Q96KX1 117 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 Q96MT0 163 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 INPP5EQ9NRR6 644 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 DPM3Q9P2X0 92 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 EXOGQ9Y2C4 368 aaKnown RBP9.87□□□□□ -0.83
SPG11-219ENST00000559822 GMPPBQ9Y5P6 360 aa9.87□□□□□ -0.83
SPG11-219ENST00000559822 TMEM212A6NML5 194 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 OR4C45A6NMZ5 311 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 FAM90A22PA8MWA6 464 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 LEUTXA8MZ59 168 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 G3V4G9 280 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 ALX3O95076 343 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 FADS2O95864 444 aaKnown RBP9.86□□□□□ -0.83
SPG11-219ENST00000559822 HCKP08631 526 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 CCDC159P0C7I6 412 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 CD28P10747 220 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 DBTP11182 482 aaKnown RBP9.86□□□□□ -0.83
SPG11-219ENST00000559822 LMO1P25800 156 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 PTGFRP43088 359 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 BDH1Q02338 343 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 GALEQ14376 348 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 KPRPQ5T749 579 aaPredicted RBP9.86□□□□□ -0.83
SPG11-219ENST00000559822 SAMD5Q5TGI4 173 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 SERPINA12Q8IW75 414 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 ABHD12Q8N2K0 398 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 OR4D6Q8NGJ1 314 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 OR4P4Q8NGL7 312 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 CORO2AQ92828 525 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 R3HDM4Q96D70 268 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 LGALS12Q96DT0 336 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 ALG8Q9BVK2 526 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 WNT10AQ9GZT5 417 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 LIN7BQ9HAP6 207 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 OR6C3Q9NZP0 311 aa9.86□□□□□ -0.83
SPG11-219ENST00000559822 IGKV1-12A0A0C4DH73 117 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 ODAMA1E959 279 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 ZNF729A6NN14 1252 aaPredicted RBP9.85□□□□□ -0.83
SPG11-219ENST00000559822 TOR1AO14656 332 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 DEGS1O15121 323 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 SULT1B1O43704 296 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 IGKV1D-12P01611 117 aa9.85□□□□□ -0.83
SPG11-219ENST00000559822 TMEM225BP0DP42 221 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms