RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 MED19A0JLT2 244 aaPredicted RBP8.65□□□□□ -1.03
LRRC28-216ENST00000559819 JMJD7P0C870 316 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 MAGEA5P43359 124 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 SULT1A2P50226 295 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 CAV2P51636 162 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 GPM6AP51674 278 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 PRDX4Q13162 271 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 IGFBP7Q16270 282 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 BTNL8Q6UX41 500 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 LINC00696Q6ZRV3 163 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 MOB3AQ96BX8 217 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 MSI2Q96DH6 328 aaKnown RBP8.65□□□□□ -1.03
LRRC28-216ENST00000559819 GALNT14Q96FL9 552 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 TP53RKQ96S44 253 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 ARRDC1-AS1Q9H2J1 176 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 PCDHB16Q9NRJ7 776 aa8.65□□□□□ -1.03
LRRC28-216ENST00000559819 BOKQ9UMX3 212 aaPredicted RBP8.65□□□□□ -1.03
LRRC28-216ENST00000559819 CARHSP1Q9Y2V2 147 aaKnown RBP8.65□□□□□ -1.03
LRRC28-216ENST00000559819 DOCK10Q96BY6 2186 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 OR8U9P0C7N5 309 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 FUT3P21217 361 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 DUSP1P28562 367 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 HAAOP46952 286 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 ASCL1P50553 236 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 CLDN18P56856 261 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF528Q3MIS6 628 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 OR8U1Q8NH10 309 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 HPSE2Q8WWQ2 592 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 EXTL1Q92935 676 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 SPSB4Q96A44 273 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 TMEM45BQ96B21 275 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 SAT2Q96F10 170 aaPredicted RBP8.64□□□□□ -1.03
LRRC28-216ENST00000559819 PRDM14Q9GZV8 571 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF391Q9UJN7 358 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 RCL1Q9Y2P8 373 aaKnown RBP8.64□□□□□ -1.03
LRRC28-216ENST00000559819 RNASEK-C17orf49H0YIS7 233 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 H7C1Q1 480 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 NGFP01138 241 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 PPYP01298 95 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 SFTA3P0C7M3 94 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 CD80P33681 288 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 GLP1RP43220 463 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 HERV-K104P61576 105 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 EIF5AP63241 154 aaKnown RBP8.64□□□□□ -1.03
LRRC28-216ENST00000559819 FBXW12Q6X9E4 464 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 SLC35G3Q8N808 338 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 AIFM2Q9BRQ8 373 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 RSRP1Q9BUV0 290 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 OR51B6Q9H340 312 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 RCC2Q9P258 522 aaKnown RBP8.64□□□□□ -1.03
LRRC28-216ENST00000559819 MRPS18CQ9Y3D5 142 aaKnown RBP8.64□□□□□ -1.03
LRRC28-216ENST00000559819 CELSR3Q9NYQ7 3312 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 FREM1Q5H8C1 2179 aa8.64□□□□□ -1.03
LRRC28-216ENST00000559819 SHANK1Q9Y566 2161 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 PQLC2LA1A4F0 135 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 NUDT19A8MXV4 375 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 E5RGE8 158 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 NME2P1O60361 137 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SCTP09683 121 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 NHLH2Q02577 135 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 TSC22D1Q15714 1073 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 TMEM211Q6ICI0 200 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 COLCA1Q6ZS62 124 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF488Q96MN9 340 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 TAAR9Q96RI9 348 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 FAM173AQ9BQD7 235 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SUCNR1Q9BXA5 334 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SEC11CQ9BY50 192 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 NSG2Q9Y328 171 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 IGKV3D-15A0A087WSY6 115 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 RPL36A-HNRNPH2H7BZ11 118 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 C1QL1O75973 258 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 JTBO76095 146 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 ITGA3P26006 1051 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 FHITP49789 147 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 OR1C1Q15619 314 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 HFEQ30201 348 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 AKIRIN2Q53H80 203 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 ABHD17BQ5VST6 288 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 EIF5AL1Q6IS14 154 aaKnown RBP8.63□□□□□ -1.03
LRRC28-216ENST00000559819 ETV3LQ6ZN32 361 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 IQCF2Q8IXL9 164 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SUMF1Q8NBK3 374 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 REPIN1Q9BWE0 567 aaKnown RBP8.63□□□□□ -1.03
LRRC28-216ENST00000559819 TTTY12Q9BZ98 90 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SPRY4Q9C004 299 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 SH3BGRL3Q9H299 93 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 R4GN57 208 aa8.63□□□□□ -1.03
LRRC28-216ENST00000559819 NKX2-6A6NCS4 301 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 ZNF732B4DXR9 585 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SYNGR1O43759 233 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 LILRA1O75019 489 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 GAPDHP04406 335 aaKnown RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 DHRS7BQ6IAN0 325 aaPredicted RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 MRPL21Q7Z2W9 205 aaKnown RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 NUFIP2Q7Z417 695 aaKnown RBP8.62□□□□□ -1.03
LRRC28-216ENST00000559819 LGI3Q8N145 548 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 LRTM2Q8N967 370 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 DMBX1Q8NFW5 382 aa8.62□□□□□ -1.03
LRRC28-216ENST00000559819 SECTM1Q8WVN6 248 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms