RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 KLRD1Q13241 179 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR2G6Q5TZ20 316 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 ASPHD2Q6ICH7 369 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 METAP1DQ6UB28 335 aaPredicted RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 RBMS3Q6XE24 437 aaKnown RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 PDZD9Q8IXQ8 264 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 CMTM4Q8IZR5 234 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 SETD9Q8NE22 299 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR13C3Q8NGS6 347 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR13C9Q8NGT0 318 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 RGP1Q92546 391 aaPredicted RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 TNFRSF14Q92956 283 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 RFT1Q96AA3 541 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 SPSB1Q96BD6 273 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 SPACA5Q96QH8 159 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 C11orf54Q9H0W9 315 aaPredicted RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 SIRT7Q9NRC8 400 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR14J1Q9UGF5 321 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 DIMT1Q9UNQ2 313 aaKnown RBP4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 PKD1L1Q8TDX9 2849 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 MGAM2Q2M2H8 2515 aa4.93□□□□□ -1.62
CTDSPL2-204ENST00000558966 IGKV1-12A0A0C4DH73 117 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 TRBV2A0A0J9YWF9 115 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 A0A0U1RQK1 487 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 A0A1W2PQ09 198 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 C9orf118A6NHY6 69 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 H0YAE9 185 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 RNASEK-C17orf49H0YIS7 233 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CLDN34H7C241 214 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 M0R1W7 72 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC1A7O00341 560 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 HOXA3O43365 443 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SPRY1O43609 319 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF737O75373 536 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 LALBAP00709 142 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 IGKV1D-12P01611 117 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MT-ND2P03891 347 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CCDC159P0C7I6 412 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 PRKACBP22694 351 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 NPBWR2P48146 333 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 COMPP49747 757 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CAPZA1P52907 286 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 GBX2P52951 348 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ATP1B3P54709 279 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MTCP1P56278 107 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 LINC00310P59036 64 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 COL10A1Q03692 680 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 GABPB1Q06547 395 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MRPL28Q13084 256 aaKnown RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 IL18R1Q13478 541 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CDK5R1Q15078 307 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC9A3R2Q15599 337 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 GAGE13Q4V321 117 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 C8orf59Q8N0T1 100 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 FAM185AQ8N0U4 392 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF561Q8N587 486 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 PARP16Q8N5Y8 322 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF485Q8NCK3 441 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR5AK2Q8NH90 309 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CFHR4Q92496 578 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 GGHQ92820 318 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 OPALINQ96PE5 141 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MYCBPQ99417 103 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 COMMD4Q9H0A8 199 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZCCHC4Q9H5U6 513 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 DCLRE1BQ9H816 532 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 UNKLQ9H9P5 680 aaKnown RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 RBFOX1Q9NWB1 397 aaKnown RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SLC23A1Q9UHI7 598 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CLEC2DQ9UHP7 191 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CAB39Q9Y376 341 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SIRT4Q9Y6E7 314 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 HSPE1-MOB4S4R3N1 261 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 UBE2QL1A1L167 161 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 NPIPB6E9PJ23 425 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 K7N7A8 449 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 SULT1B1O43704 296 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ANGPTL7O43827 346 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 XPNPEP2O43895 674 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 TK1P04183 234 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MELTFP08582 738 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 PIPP12273 146 aaPredicted RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 BCL3P20749 454 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 RPL31P62899 125 aaKnown RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 PDZK1IP1Q13113 114 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF273Q14593 569 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 CCDC58Q4VC31 144 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 KIAA2026Q5HYC2 2103 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 HCP5Q6MZN7 132 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ZNF529Q6P280 563 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 Q6YL49 198 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 C1orf122Q6ZSJ8 110 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 MKXQ8IYA7 352 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 PNKDQ8N490 385 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 C11orf42Q8N5U0 333 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR2C3Q8N628 320 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 ASCC1Q8N9N2 400 aaKnown RBP4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 OR5D18Q8NGL1 313 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 HAVCR2Q8TDQ0 301 aa4.92□□□□□ -1.62
CTDSPL2-204ENST00000558966 TSEN15Q8WW01 171 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms