RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 CLLU1OSQ5K130 101 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 COPS6Q7L5N1 327 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SSX6Q7RTT6 188 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 LINC00337Q8N6G1 96 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 CCNYL1Q8N7R7 359 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 OR5H2Q8NGV7 314 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 OR51Q1Q8NH59 317 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 PDCD6IPQ8WUM4 868 aaKnown RBP1.31□□□□□ -2.2
VPS13C-207ENST00000558919 TMEM239Q8WW34 195 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 YIPF5Q969M3 257 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ADTRPQ96IZ2 230 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SMIM8Q96KF7 97 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 TRNT1Q96Q11 434 aaKnown RBP1.31□□□□□ -2.2
VPS13C-207ENST00000558919 DERL3Q96Q80 235 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 METTL26Q96S19 204 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 CIB1Q99828 191 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ACBD6Q9BR61 282 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 COPS4Q9BT78 406 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 BEX2Q9BXY8 128 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 NDEL1Q9GZM8 345 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 PORCNQ9H237 461 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SPACA1Q9HBV2 294 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 FAM60AQ9NP50 221 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ABCB9Q9NP78 766 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 C12orf4Q9NQ89 552 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 NLE1Q9NVX2 485 aaPredicted RBP1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SDHAF2Q9NX18 166 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 CLEC2DQ9UHP7 191 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 ANXA10Q9UJ72 324 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 KLF13Q9Y2Y9 288 aaPredicted RBP1.31□□□□□ -2.2
VPS13C-207ENST00000558919 SLC22A7Q9Y694 548 aa1.31□□□□□ -2.2
VPS13C-207ENST00000558919 IGLV10-54A0A075B6I4 117 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 TRPC5OSA6NMA1 111 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 OR2AT4A6NND4 320 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 IQCF5A8MTL0 148 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 C3orf84H3BNL1 204 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 UPK2O00526 184 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 AQP9O43315 295 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ENSAO43768 121 aaKnown RBP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 SLC37A4O43826 429 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 FADS2O95864 444 aaKnown RBP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CST4P01036 141 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CD8AP01732 235 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 OR5AC1P0C628 307 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 NQO2P16083 231 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 NUDT2P50583 147 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 UBE2KP61086 200 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 STX4Q12846 297 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 SLC9A3R2Q15599 337 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CLEC12AQ5QGZ9 265 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 PDPK2PQ6A1A2 396 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF660Q6AZW8 331 aaPredicted RBP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 FAHD1Q6P587 224 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 UGT2A3Q6UWM9 527 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ITPRIPQ8IWB1 547 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CYP4Z2PQ8N1L4 340 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 GAPTQ8N292 157 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 C17orf78Q8N4C9 275 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ZDHHC22Q8N966 263 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF555Q8NEP9 628 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 OR8A1Q8NGG7 326 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 OR4C13Q8NGP0 309 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CLHC1Q8NHS4 586 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ANGPTL6Q8NI99 470 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 UBA3Q8TBC4 463 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CCDC12Q8WUD4 166 aaPredicted RBP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CPB2Q96IY4 423 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 QKIQ96PU8 341 aaKnown RBP eCLIP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 PEBP4Q96S96 227 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 CYTH2Q99418 400 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 OR52A5Q9H2C5 316 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 ACOT13Q9NPJ3 140 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 INIPQ9NRY2 104 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 RBM22Q9NW64 420 aaKnown RBP eCLIP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 RMND1Q9NWS8 449 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 NXT1Q9UKK6 140 aaKnown RBP1.3□□□□□ -2.2
VPS13C-207ENST00000558919 POFUT2Q9Y2G5 429 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 INSIG2Q9Y5U4 225 aa1.3□□□□□ -2.2
VPS13C-207ENST00000558919 GMNCA6NCL1 334 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 RNASEK-C17orf49H0YIS7 233 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 hCG_2039718K7EN88 272 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 OR2A4O95047 310 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 KCNK2O95069 426 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 CPSF4O95639 269 aaKnown RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 LDOC1O95751 146 aaPredicted RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 NRASP01111 189 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 HRASP01112 189 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 KRASP01116 189 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TPM3P06753 285 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 SEC11BP0C7V7 166 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 GIMD1P0DJR0 217 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TAC1P20366 129 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 SLC6A1P30531 599 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 UGT2B10P36537 528 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TUFMP49411 452 aaKnown RBP1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TSPAN5P62079 268 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 TPM4P67936 248 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 C2orf80Q0P641 193 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ELOCQ15369 112 aa1.29□□□□□ -2.2
VPS13C-207ENST00000558919 ZNF141Q15928 474 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms