RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 DSCAML1Q8TD84 2053 aa9.26□□□□□ -0.93
CASC4-205ENST00000558735 IGHV2-26A0A0B4J1V2 119 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 OR4C45A6NMZ5 311 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 H3BNX3 289 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 J3QLW9 94 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 EI24O14681 340 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 SH2D1BO14796 132 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 CIB2O75838 187 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 OR2H2O95918 312 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 CYB5AP00167 134 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 PRB2P02812 416 aaPredicted RBP9.25□□□□□ -0.93
CASC4-205ENST00000558735 MT-ND2P03891 347 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 CD28P10747 220 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 ZNF19P17023 458 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 LMO1P25800 156 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 SNU13P55769 128 aaKnown RBP9.25□□□□□ -0.93
CASC4-205ENST00000558735 ALKBH1Q13686 389 aaKnown RBP9.25□□□□□ -0.93
CASC4-205ENST00000558735 VAX1Q5SQQ9 334 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 MEDAGQ5VYS4 303 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 BAIAP2L2Q6UXY1 529 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 LHFPL2Q6ZUX7 228 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 LHFPL3Q86UP9 236 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 CORO2AQ92828 525 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 PELI1Q96FA3 418 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 OR5M11Q96RB7 305 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 ZNF649Q9BS31 505 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 PRSS22Q9GZN4 317 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 WNT10AQ9GZT5 417 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 TMEM133Q9H2Q1 129 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 GLS2Q9UI32 602 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 PITPNC1Q9UKF7 332 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 HHLA2Q9UM44 414 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 GSTK1Q9Y2Q3 226 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 PLXNB1O43157 2135 aa9.25□□□□□ -0.93
CASC4-205ENST00000558735 NOTCH3Q9UM47 2321 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 SIRPB1O00241 398 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 FBXO24O75426 580 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 HTR1AP08908 422 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 ZNF20P17024 532 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 GABRB1P18505 474 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 GDNFP39905 211 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 GLIPR1P48060 266 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 P2RX3P56373 397 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 EMX1Q04741 257 aaPredicted RBP9.24□□□□□ -0.93
CASC4-205ENST00000558735 SLC34A1Q06495 639 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 AESQ08117 197 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 NSUN5P1Q3KNT7 163 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 KIAA2026Q5HYC2 2103 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 SPIN3Q5JUX0 258 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 Q6P435 159 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 OR4P4Q8NGL7 312 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 MRAPQ8TCY5 172 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 SPSB1Q96BD6 273 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 LGALS12Q96DT0 336 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 C4orf36Q96KX1 117 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 OPALINQ96PE5 141 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 OCSTAMPQ9BR26 566 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 CLEC7AQ9BXN2 247 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 ISG20L2Q9H9L3 353 aaKnown RBP9.24□□□□□ -0.93
CASC4-205ENST00000558735 NECAP2Q9NVZ3 263 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 MYRFQ9Y2G1 1151 aa9.24□□□□□ -0.93
CASC4-205ENST00000558735 UBE2J1Q9Y385 318 aaPredicted RBP9.24□□□□□ -0.93
CASC4-205ENST00000558735 E9PI62 339 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 KDM4BO94953 1096 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 CD24P25063 80 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 HTR1DP28221 377 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 ALDH3A2P51648 485 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 SCN1BQ07699 218 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 GALEQ14376 348 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
CASC4-205ENST00000558735 HEPN1Q6WQI6 88 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 ZBTB49Q6ZSB9 765 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 TRAPPC6BQ86SZ2 158 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 SAXO1Q8IYX7 474 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 CBR4Q8N4T8 237 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 OR5D18Q8NGL1 313 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 OR13C3Q8NGS6 347 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 OR13C9Q8NGT0 318 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 RHOXF1Q8NHV9 184 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 NDNFQ8TB73 568 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 CITED2Q99967 270 aaPredicted RBP9.23□□□□□ -0.93
CASC4-205ENST00000558735 COMMD4Q9H0A8 199 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 MMP28Q9H239 520 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 ZCCHC4Q9H5U6 513 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 AMBNQ9NP70 447 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 EXOSC4Q9NPD3 245 aaKnown RBP9.23□□□□□ -0.93
CASC4-205ENST00000558735 TAS2R3Q9NYW6 316 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 DPM3Q9P2X0 92 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 ORC6Q9Y5N6 252 aa9.23□□□□□ -0.93
CASC4-205ENST00000558735 TRGV10A0A0A0MS01 117 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 F2RL2O00254 374 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 IGLV1-47P01700 117 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 CGB3P0DN86 165 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 CGB7P0DN87 165 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 CDK2P24941 298 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 ZP1P60852 638 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 BDH1Q02338 343 aa9.22□□□□□ -0.93
CASC4-205ENST00000558735 CDK5R1Q15078 307 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms