RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 ZNF626Q68DY1 528 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 SLC25A26Q70HW3 274 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 ENTHD1Q8IYW4 607 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 C11orf42Q8N5U0 333 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 KLHDC1Q8N7A1 406 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 DNAAF1Q8NEP3 725 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 OR5AN1Q8NGI8 311 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 RPS4Y2Q8TD47 263 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 SLAMF9Q96A28 289 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 CENPNQ96H22 339 aaPredicted RBP6.53□□□□□ -1.36
TRAF3-205ENST00000558700 AJUBAQ96IF1 538 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 ZNF714Q96N38 554 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 NKX3-1Q99801 234 aaPredicted RBP6.53□□□□□ -1.36
TRAF3-205ENST00000558700 CDCA4Q9BXL8 241 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 ABCB10Q9NRK6 738 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 PITPNC1Q9UKF7 332 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 TCF19Q9Y242 345 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 PCDHGB5Q9Y5G0 923 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 LINC00312Q9Y6C7 94 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 NOTCH1P46531 2555 aa6.53□□□□□ -1.36
TRAF3-205ENST00000558700 TRRAPQ9Y4A5 3859 aa6.52□□□□□ -1.36
TRAF3-205ENST00000558700 IGKV1-27A0A075B6S5 117 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 hADV38S2A0JD32 116 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 FAM90A8PA6NJQ4 464 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 F2RL2O00254 374 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 CHST1O43916 411 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 HAND1O96004 215 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ALDOBP05062 364 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 OCM2P0CE71 109 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 OCMP0CE72 109 aaPredicted RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 IGHV1-8P0DP01 117 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 GABRR1P24046 479 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 KIR3DL2P43630 455 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 POU3F4P49335 361 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 RBP2P50120 134 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 DLX6P56179 175 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ISL1P61371 349 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ACTA2P62736 377 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ACTG2P63267 376 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF85Q03923 595 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF91Q05481 1191 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 EDDM3AQ14507 147 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 GRK1Q15835 563 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 TP53I3Q53FA7 332 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 PLA1AQ53H76 456 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 SPIN3Q5JUX0 258 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 CRIP3Q6Q6R5 217 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 UTS2BQ765I0 119 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 TCF23Q7RTU1 214 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 KCTD20Q7Z5Y7 419 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 LHFPL4Q7Z7J7 247 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 EGFL6Q8IUX8 553 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 PRSS35Q8N3Z0 413 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 OR11H6Q8NGC7 330 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 OR2G2Q8NGZ5 317 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 EME1Q96AY2 570 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 MRPL48Q96GC5 212 aaKnown RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 SNX22Q96L94 193 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 MYCBPQ99417 103 aaPredicted RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 SEBOXQ9HB31 216 aaPredicted RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 NEK6Q9HC98 313 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 RBFOX1Q9NWB1 397 aaKnown RBP6.52□□□□□ -1.37
TRAF3-205ENST00000558700 FAM53CQ9NYF3 392 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 MTCH1Q9NZJ7 389 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 GLS2Q9UI32 602 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 SIGLEC9Q9Y336 463 aa6.52□□□□□ -1.37
TRAF3-205ENST00000558700 DAPL1A0PJW8 107 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 SNTNA6NMZ2 147 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 MGST3O14880 152 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 ENTPD6O75354 484 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 INMTO95050 263 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 HTR1AP08908 422 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 PRKACAP17612 351 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 AZGP1P25311 298 aaKnown RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 PAX6P26367 422 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 POLR2IP36954 125 aaKnown RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 OR12D2P58182 307 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 DYNC1I2Q13409 638 aaKnown RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 FAM189A2Q15884 450 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 MINOS1Q5TGZ0 78 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 MEDAGQ5VYS4 303 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 ZBTB49Q6ZSB9 765 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 TRAPPC6BQ86SZ2 158 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 FAM58AQ8N1B3 248 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF676Q8N7Q3 588 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 NDNFQ8TB73 568 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 TRUB1Q8WWH5 349 aaKnown RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 CFHR4Q92496 578 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 SPSB1Q96BD6 273 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 MALSU1Q96EH3 234 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 RNFT2Q96EX2 444 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 ADAT3Q96EY9 351 aaPredicted RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 OPALINQ96PE5 141 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 CLEC7AQ9BXN2 247 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 GAL3ST2Q9H3Q3 398 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 EXOSC4Q9NPD3 245 aaKnown RBP6.51□□□□□ -1.37
TRAF3-205ENST00000558700 HHLA2Q9UM44 414 aa6.51□□□□□ -1.37
TRAF3-205ENST00000558700 SESN1Q9Y6P5 492 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms