RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 ACY3Q96HD9 319 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 IGSF21Q96ID5 467 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 ZNF514Q96K75 400 aaPredicted RBP2.77□□□□□ -1.97
HERC1-203ENST00000558532 Q96M85 177 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 WFIKKN1Q96NZ8 548 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 SDF2Q99470 211 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 C20orf144Q9BQM9 153 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 COMMD4Q9H0A8 199 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 PRO1933Q9H354 126 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 GAL3ST2Q9H3Q3 398 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 C11orf1Q9H5F2 150 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 C5orf66Q9H5L9 145 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 KCNJ16Q9NPI9 418 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.77□□□□□ -1.97
HERC1-203ENST00000558532 FLRT3Q9NZU0 649 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 FBXL17Q9UF56 701 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 VAX2Q9UIW0 290 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 GPR34Q9UPC5 381 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 FARSAQ9Y285 508 aaKnown RBP2.77□□□□□ -1.97
HERC1-203ENST00000558532 KLHDC2Q9Y2U9 406 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 PAM16Q9Y3D7 125 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 WDR45Q9Y484 360 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 YIPF1Q9Y548 306 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 SLCO1B1Q9Y6L6 691 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 HEATR5BQ9P2D3 2071 aa2.77□□□□□ -1.97
HERC1-203ENST00000558532 TRAV27A0A087WT01 109 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TRAV1-1A0A0B4J248 108 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 A0A1B0GU03 582 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 A0A1B0GWA3 101 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 A0A1W2PPQ1 181 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 A0A1W2PQM1 296 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 MEIS3P1A6NDR6 274 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 C5orf51A6NDU8 294 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TMEM235A6NFC5 223 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 OR2AG2A6NM03 316 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 EEF1E1-BLOC1S5C9J1V9 151 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 FTCDNL1E5RQL4 147 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 H3BQ15 152 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 K7EP13 123 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 M0QZ92 97 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 HCRTR2O43614 444 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 RAMP1O60894 148 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TBL1XO60907 577 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 CA11O75493 328 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 CBR3O75828 277 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GAGE7O76087 117 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 CLDN14O95500 239 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 CYB5R3P00387 301 aaPredicted RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 TRGC2P03986 189 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 OPN1MWP04001 364 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TYMSP04818 313 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 ISG15P05161 165 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 LINC00271P0C7V0 271 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GAGE12FP0CL80 117 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GAGE12GP0CL81 117 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GAGE12IP0CL82 117 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 OPN1MW2P0DN77 364 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 OPN1MW3P0DN78 364 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 LIPCP11150 499 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 FABP4P15090 132 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 HIST1H1TP22492 207 aaPredicted RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 AK4P27144 223 aaPredicted RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 RPL12P30050 165 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 APOBEC1P41238 236 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 ACAA2P42765 397 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 OR3A1P47881 315 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GABRA4P48169 554 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 LBX1P52954 281 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 RPS20P60866 119 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 PRPS1P60891 318 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 POLR2LP62875 67 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 CSNK1G2P78368 415 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GAGE4Q13068 117 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 EIF3IQ13347 325 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 EBPQ15125 230 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 USF2Q15853 346 aaPredicted RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 IQCJQ1A5X6 159 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 ZNF674Q2M3X9 581 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 ANKRD55Q3KP44 614 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 SCGB2B2Q4G0G5 96 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TRMT12Q53H54 448 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 WDR38Q5JTN6 314 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 SOHLH1Q5JUK2 328 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 AKR1C8PQ5T2L2 129 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GPR157Q5UAW9 335 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 HIST2H2BCQ6DN03 193 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 HIST2H2BDQ6DRA6 164 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TMEM225Q6GV28 225 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 WBP2NLQ6ICG8 309 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 OR2T2Q6IF00 324 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 SLC8B1Q6J4K2 584 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 ZNF774Q6NX45 483 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 RPUSD3Q6P087 351 aaKnown RBP2.76□□□□□ -1.97
HERC1-203ENST00000558532 LEG1Q6P5S2 330 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 CLEC18BQ6UXF7 455 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 DPPA3Q6W0C5 159 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 GALNTL5Q7Z4T8 443 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 TMEM156Q8N614 296 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 LRTM2Q8N967 370 aa2.76□□□□□ -1.97
HERC1-203ENST00000558532 SUMF2Q8NBJ7 301 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms