RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 KIR3DL3Q8N743 410 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 NKAIN3Q8N8D7 197 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 OR4M1Q8NGD0 313 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 OR5D13Q8NGL4 314 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 C22orf15Q8WYQ4 148 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 NR1H4Q96RI1 486 aaPredicted RBP10.18□□□□□ -0.78
SMAD3-205ENST00000558428 TBX15Q96SF7 602 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 CHST6Q9GZX3 395 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 C19orf12Q9NSK7 152 aa10.18□□□□□ -0.78
SMAD3-205ENST00000558428 MEGF11A6BM72 1044 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 PSPNO60542 156 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 CSTBP04080 98 aaKnown RBP10.17□□□□□ -0.78
SMAD3-205ENST00000558428 UCHL1P09936 223 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SERPINA2P20848 420 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 FPR2P25090 351 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 GABRA5P31644 462 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 GP2P55259 537 aaKnown RBP10.17□□□□□ -0.78
SMAD3-205ENST00000558428 EDDM3BP56851 147 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 EDDM3AQ14507 147 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 PDCD1Q15116 288 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 GRK1Q15835 563 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SSX1Q16384 188 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF773Q6PK81 442 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 ASCL4Q6XD76 172 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 C17orf107Q6ZR85 190 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 VMO1Q7Z5L0 202 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 CDH26Q8IXH8 852 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 PPP1R35Q8TAP8 253 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 LHX4Q969G2 390 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 MUL1Q969V5 352 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SLC6A7Q99884 636 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 MS4A7Q9GZW8 240 aaPredicted RBP10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SLITRK2Q9H156 845 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SIRT7Q9NRC8 400 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 IL36GQ9NZH8 169 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF69Q9UC07 566 aa10.17□□□□□ -0.78
SMAD3-205ENST00000558428 MRPS28Q9Y2Q9 187 aaKnown RBP10.17□□□□□ -0.78
SMAD3-205ENST00000558428 SF3B6Q9Y3B4 125 aaKnown RBP10.17□□□□□ -0.78
SMAD3-205ENST00000558428 A0A1W2PPH5 198 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 M0R1W7 72 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 MGST3O14880 152 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 DEGS1O15121 323 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 TCF21O43680 179 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF780AO75290 641 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-205ENST00000558428 SRMP19623 302 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 PSMB9P28065 219 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 OR3A1P47881 315 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 FABP5Q01469 135 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 BLMHQ13867 455 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 IL13RA2Q14627 380 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 KRTAP21-3Q3LHN1 58 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 PIGYQ3MUY2 71 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 KCTD21Q4G0X4 260 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 SLC22A6Q4U2R8 563 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 UBE2UQ5VVX9 321 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 TMEM200BQ69YZ2 307 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 AWAT2Q6E213 333 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 Q6P435 159 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 GLIPR1L1Q6UWM5 242 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 TMEM91Q6ZNR0 172 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 LRRTM1Q86UE6 522 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 Q8N7P7 452 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 CHST4Q8NCG5 386 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 Q8NFD4 153 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 OR4S1Q8NGB4 309 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 OR51T1Q8NGJ9 327 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 TBC1D15Q8TC07 691 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF418Q8TF45 676 aaPredicted RBP10.16□□□□□ -0.78
SMAD3-205ENST00000558428 PHYHIPQ92561 330 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 FCGR1BQ92637 280 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 PPIL3Q9H2H8 161 aaKnown RBP10.16□□□□□ -0.78
SMAD3-205ENST00000558428 PCDHB16Q9NRJ7 776 aa10.16□□□□□ -0.78
SMAD3-205ENST00000558428 CENPVL3A0A0U1RRI6 287 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 SLC33A1O00400 549 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-205ENST00000558428 CCRL2O00421 344 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 ARL6IP5O75915 188 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 LMO1P25800 156 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 DLX1P56177 255 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 SRSF2Q01130 221 aaKnown RBP10.15□□□□□ -0.78
SMAD3-205ENST00000558428 GPR176Q14439 515 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 ZNF273Q14593 569 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 RUSC1-AS1Q66K80 236 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 GLT8D1Q68CQ7 371 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 BRD3OSQ6XYD6 125 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 C1orf122Q6ZSJ8 110 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 LYPD6Q86Y78 171 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 PDZD9Q8IXQ8 264 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 BCL6BQ8N143 479 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-205ENST00000558428 OSR2Q8N2R0 312 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 TPRX1Q8N7U7 411 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 OR4D6Q8NGJ1 314 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 FOXRED1Q96CU9 486 aaPredicted RBP10.15□□□□□ -0.78
SMAD3-205ENST00000558428 UQCC2Q9BRT2 126 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 SUCNR1Q9BXA5 334 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 PPA2Q9H2U2 334 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 METTL8Q9H825 291 aaKnown RBP10.15□□□□□ -0.78
SMAD3-205ENST00000558428 NDUFB11Q9NX14 153 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 ST3GAL6Q9Y274 331 aa10.15□□□□□ -0.78
SMAD3-205ENST00000558428 IGHV1-69DA0A0B4J2H0 117 aa10.14□□□□□ -0.79
SMAD3-205ENST00000558428 A0A0G2JK05 382 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 138.3 ms