RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 OR2H2O95918 312 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 NDUFB7P17568 137 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 GABRR1P24046 479 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 ZFP36P26651 326 aaKnown RBP17.67■□□□□ 0.42
CASC4-204ENST00000557945 CFPP27918 469 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 NPY4RP50391 375 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 TMBIM6P55061 237 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 BLMHQ13867 455 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 TAF9Q16594 264 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 NHLRC3Q5JS37 347 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 IDNKQ5T6J7 187 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 CYB5R2Q6BCY4 276 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 Q6P435 159 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 METAP1DQ6UB28 335 aaPredicted RBP17.67■□□□□ 0.42
CASC4-204ENST00000557945 USP43Q70EL4 1123 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 FGFRL1Q8N441 504 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 LINC01356Q8N9X3 169 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 MSI2Q96DH6 328 aaKnown RBP17.67■□□□□ 0.42
CASC4-204ENST00000557945 TMEM59Q9BXS4 323 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 SEBOXQ9HB31 216 aaPredicted RBP17.67■□□□□ 0.42
CASC4-204ENST00000557945 ACANP16112 2415 aa17.67■□□□□ 0.42
CASC4-204ENST00000557945 TMEM14DPA8MWL7 114 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 QRFPP83859 136 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 UNC119Q13432 240 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 OR2W3Q7Z3T1 314 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 NDNFQ8TB73 568 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 C1orf159Q96HA4 380 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 DCSTAMPQ9H295 470 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 MALRD1Q5VYJ5 2156 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 TMEM82A0PJX8 343 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 FCN3O75636 299 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 MSMBP08118 114 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 FOSL1P15407 271 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 LINC00596Q86U02 117 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 CROCCP3Q8IVE0 287 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 CHST4Q8NCG5 386 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 H1FXQ92522 213 aaKnown RBP17.66■□□□□ 0.42
CASC4-204ENST00000557945 ISOC1Q96CN7 298 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 SNX22Q96L94 193 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 BCL7BQ9BQE9 202 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 CHST6Q9GZX3 395 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 OR5V1Q9UGF6 321 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 CEPT1Q9Y6K0 416 aa17.66■□□□□ 0.42
CASC4-204ENST00000557945 TMEM272A0A1B0GTI8 110 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 KIAA1324LA8MWY0 1029 aaPredicted RBP17.65■□□□□ 0.42
CASC4-204ENST00000557945 K7N7A8 449 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 HSPB6O14558 160 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 PSPNO60542 156 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 ZNF737O75373 536 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 TGFAP01135 160 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 TK1P04183 234 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 SNRPBP14678 240 aaKnown RBP17.65■□□□□ 0.42
CASC4-204ENST00000557945 ZNF16P17020 682 aaPredicted RBP17.65■□□□□ 0.42
CASC4-204ENST00000557945 RPS27AP62979 156 aaKnown RBP17.65■□□□□ 0.42
CASC4-204ENST00000557945 MPV17LQ2QL34 196 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 ATAD3CQ5T2N8 411 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 C17orf107Q6ZR85 190 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 PPP1R35Q8TAP8 253 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 SLC25A46Q96AG3 418 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 Q96M66 194 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 FAM234AQ9H0X4 552 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 ZNF581Q9P0T4 197 aa17.65■□□□□ 0.42
CASC4-204ENST00000557945 LOC105371242A0A075B767 164 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 A8MXK9 166 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 SLC33A1O00400 549 aaPredicted RBP17.64■□□□□ 0.41
CASC4-204ENST00000557945 LMO1P25800 156 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 SPCS2Q15005 226 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 GRK1Q15835 563 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 PAN3Q58A45 887 aaKnown RBP17.64■□□□□ 0.41
CASC4-204ENST00000557945 CD276Q5ZPR3 534 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 BTN2A1Q7KYR7 527 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 OR4S1Q8NGB4 309 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 URM1Q9BTM9 101 aaKnown RBP17.64■□□□□ 0.41
CASC4-204ENST00000557945 PPA2Q9H2U2 334 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 FBLN5Q9UBX5 448 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 RAB22AQ9UL26 194 aa17.64■□□□□ 0.41
CASC4-204ENST00000557945 ABCA2Q9BZC7 2435 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 YLPM1P49750 1951 aaKnown RBP17.63■□□□□ 0.41
CASC4-204ENST00000557945 TRAV24A0A0B4J272 114 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 H3BMQ9 156 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 LDLRAD4O15165 306 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 PAHP00439 452 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 PLA2G7Q13093 441 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 EDDM3AQ14507 147 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 OR8H2Q8N162 312 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 OR5D13Q8NGL4 314 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 SMR3AQ99954 134 aa17.63■□□□□ 0.41
CASC4-204ENST00000557945 ZNF469Q96JG9 3925 aaPredicted RBP17.62■□□□□ 0.41
CASC4-204ENST00000557945 ABCA1O95477 2261 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 CSPG4Q6UVK1 2322 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A10PA6NDY2 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A18PA6NE21 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A16PA6NEW6 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A20PA6NIJ5 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A8PA6NJQ4 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A7PA6NKC0 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A22PA8MWA6 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A12PA8MX19 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A5PA8MXJ8 464 aa17.62■□□□□ 0.41
CASC4-204ENST00000557945 FAM90A23PA8MXZ1 464 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms