RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 TGFBR2P37173 567 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 GP2P55259 537 aaKnown RBP13.68□□□□□ -0.22
NEK9-211ENST00000557673 FABP5Q01469 135 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 PDZK1IP1Q13113 114 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 TAF9Q16594 264 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 METTL11BQ5VVY1 283 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 ACP7Q6ZNF0 438 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 CEACAM19Q7Z692 300 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 BATF2Q8N1L9 274 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 FGFRL1Q8N441 504 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 RASL12Q9NYN1 266 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 MTCH1Q9NZJ7 389 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 NLKQ9UBE8 527 aa13.68□□□□□ -0.22
NEK9-211ENST00000557673 IGKV1-12A0A0C4DH73 117 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 DVL1O14640 695 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 ANGPTL7O43827 346 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 NXPH2O95156 264 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 IGKV1D-12P01611 117 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 SMIM18P0DKX4 95 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 C11orf91Q3C1V1 193 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 HSD17B12Q53GQ0 312 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 SYT6Q5T7P8 510 aaPredicted RBP13.67□□□□□ -0.22
NEK9-211ENST00000557673 CD200R1LQ6Q8B3 271 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 MKXQ8IYA7 352 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 Q8IYB0 196 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 SAXO1Q8IYX7 474 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 NKAIN3Q8N8D7 197 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 PHYHIPQ92561 330 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 CCL13Q99616 98 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 NKX3-1Q99801 234 aaPredicted RBP13.67□□□□□ -0.22
NEK9-211ENST00000557673 PPIL3Q9H2H8 161 aaKnown RBP13.67□□□□□ -0.22
NEK9-211ENST00000557673 SNTG1Q9NSN8 517 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 ZNF222Q9UK12 451 aa13.67□□□□□ -0.22
NEK9-211ENST00000557673 CENPVL3A0A0U1RRI6 287 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 NKX6-3A6NJ46 265 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 OR2AT4A6NND4 320 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 F8VVB4 439 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 F8VWA3 439 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 CLPXO76031 633 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 CYB5AP00167 134 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 SFTPBP07988 381 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 AMY2BP19961 511 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 BCL3P20749 454 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 OR3A4PP47883 348 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 RUSC1-AS1Q66K80 236 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 FAM216BQ8N7L0 139 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 ZSCAN4Q8NAM6 433 aaPredicted RBP13.66□□□□□ -0.22
NEK9-211ENST00000557673 OR5T2Q8NGG2 359 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 LINC01006Q8NI28 216 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 ANGPTL6Q8NI99 470 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 TNFAIP8L1Q8WVP5 186 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 ST8SIA4Q92187 359 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 WDFY2Q96P53 400 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 GPER1Q99527 375 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 DNTTIP1Q9H147 329 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 TCF7L1Q9HCS4 588 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 VCX3AQ9NNX9 186 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 RBFOX1Q9NWB1 397 aaKnown RBP13.66□□□□□ -0.22
NEK9-211ENST00000557673 KAAG1Q9UBP8 84 aa13.66□□□□□ -0.22
NEK9-211ENST00000557673 IGKV1D-17A0A075B6S4 117 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 IGHV1-69DA0A0B4J2H0 117 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 GPR137BO60478 399 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 ARL6IP5O75915 188 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 KDM4BO94953 1096 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 IGHV1-69P01742 117 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 TFF1P04155 84 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 MAS1P04201 325 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 PSG2P11465 335 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 MMP9P14780 707 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 ZNF93P35789 620 aaPredicted RBP13.65□□□□□ -0.22
NEK9-211ENST00000557673 NPBWR2P48146 333 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 ATPAF1Q5TC12 328 aaPredicted RBP13.65□□□□□ -0.22
NEK9-211ENST00000557673 GDPGP1Q6ZNW5 385 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 BTN2A1Q7KYR7 527 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 LRRTM1Q86UE6 522 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 SATL1Q86VE3 508 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 LYPD6Q86Y78 171 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 PXT1Q8NFP0 134 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 EMG1Q92979 244 aaKnown RBP13.65□□□□□ -0.22
NEK9-211ENST00000557673 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 FAM192AQ9GZU8 254 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 DPAGT1Q9H3H5 408 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 IL36RNQ9UBH0 155 aa13.65□□□□□ -0.22
NEK9-211ENST00000557673 PRKDCP78527 4128 aaKnown RBP13.65□□□□□ -0.22
NEK9-211ENST00000557673 DSCAML1Q8TD84 2053 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 ECDO95905 644 aaPredicted RBP13.64□□□□□ -0.23
NEK9-211ENST00000557673 TMEM225BP0DP42 221 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 SELLP14151 372 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 GALP22466 123 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 IKZF1Q13422 519 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 ZNF788Q6ZQV5 615 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 SLC36A1Q7Z2H8 476 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 CDH26Q8IXH8 852 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 TBX15Q96SF7 602 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 STUB1Q9UNE7 303 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 FAM96BQ9Y3D0 163 aa13.64□□□□□ -0.23
NEK9-211ENST00000557673 TRDV1A0A1B0GX56 115 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 SIGLEC5O15389 551 aa13.63□□□□□ -0.23
NEK9-211ENST00000557673 JUNBP17275 347 aaPredicted RBP13.63□□□□□ -0.23
NEK9-211ENST00000557673 SRMP19623 302 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms