RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 KIR3DL2P43630 455 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 OR3A4PP47883 348 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 P2RX3P56373 397 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 EGFEM1PQ0D2K5 195 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 IL18R1Q13478 541 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 AADACL4Q5VUY2 407 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 C16orf82Q7Z2V1 217 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 FAM58AQ8N1B3 248 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 ITFG2Q969R8 447 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 ADAT3Q96EY9 351 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-210ENST00000557431 WWC2-AS2Q96NR7 200 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 H2AFY2Q9P0M6 372 aaPredicted RBP11.18□□□□□ -0.62
SLIRP-210ENST00000557431 HHLA2Q9UM44 414 aa11.18□□□□□ -0.62
SLIRP-210ENST00000557431 IGKV1-12A0A0C4DH73 117 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 A0A1W2PQL4 384 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-210ENST00000557431 PSMB11A5LHX3 300 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 DHRS7CA6NNS2 312 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 MGST3O14880 152 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 OR2H2O95918 312 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 IGKV1D-12P01611 117 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 IGLV1-47P01700 117 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 KRT8P05787 483 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 BRS3P32247 399 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 SCN1BQ07699 218 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 HLA-DRB5Q30154 266 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 TP53I3Q53FA7 332 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 NXNL2Q5VZ03 156 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 FAHD1Q6P587 224 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 OR5D18Q8NGL1 313 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 TMEM163Q8TC26 289 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 AKR1E2Q96JD6 320 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
SLIRP-210ENST00000557431 PPIL3Q9H2H8 161 aaKnown RBP11.17□□□□□ -0.62
SLIRP-210ENST00000557431 UBE2J1Q9Y385 318 aaPredicted RBP11.17□□□□□ -0.62
SLIRP-210ENST00000557431 TRBV2A0A0J9YWF9 115 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 LEUTXA8MZ59 168 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 E9PQ18 207 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 GATBO75879 557 aaKnown RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 CLIC3O95833 236 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 SNRNP70P08621 437 aaKnown RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 NFYBP25208 207 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 THBS3P49746 956 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 ATP1B3P54709 279 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 ACTR3P61158 418 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 BDH1Q02338 343 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 DIAPH2-AS1Q14236 149 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 ATXN7L3Q14CW9 347 aaPredicted RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 C1orf146Q5VVC0 180 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 C12orf73Q69YU5 71 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 ZBTB49Q6ZSB9 765 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 OSR2Q8N2R0 312 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 OR10H4Q8NGA5 316 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 TFAP2CQ92754 450 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 LEAP2Q969E1 77 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 UTP4Q969X6 686 aaKnown RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 RBMXL1Q96E39 390 aaKnown RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 NRBF2Q96F24 287 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 COQ2Q96H96 371 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 ADI1Q9BV57 179 aa11.16□□□□□ -0.62
SLIRP-210ENST00000557431 EXOSC4Q9NPD3 245 aaKnown RBP11.16□□□□□ -0.62
SLIRP-210ENST00000557431 TRGV10A0A0A0MS01 117 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 METTL15A6NJ78 407 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 ZAR1LA6NP61 321 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 NUDT19A8MXV4 375 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 BUB1B-PAK6H3BSN5 160 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 HSPB6O14558 160 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 TOR1AO14656 332 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 DUS4LO95620 317 aaKnown RBP11.15□□□□□ -0.62
SLIRP-210ENST00000557431 ATF1P18846 271 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 RBP2P50120 134 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 MTCP1P56278 107 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 RPL23AP62750 156 aaKnown RBP11.15□□□□□ -0.62
SLIRP-210ENST00000557431 EFNB1P98172 346 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 KPNB1Q14974 876 aaKnown RBP11.15□□□□□ -0.62
SLIRP-210ENST00000557431 ZNF146Q15072 292 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 LTC4SQ16873 150 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 C17orf58Q2M2W7 97 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 HEPN1Q6WQI6 88 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 LCNL1Q6ZST4 164 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 KLHL30-AS1Q8NEE0 82 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 OR10AC1Q8NH08 325 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 OR56B4Q8NH76 319 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 ZNF596Q8TC21 504 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 DPF1Q92782 380 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 RNF166Q96A37 237 aaPredicted RBP11.15□□□□□ -0.62
SLIRP-210ENST00000557431 MNTQ99583 582 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 GAL3ST2Q9H3Q3 398 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 HMG20AQ9NP66 347 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 KRT84Q9NSB2 600 aa11.15□□□□□ -0.62
SLIRP-210ENST00000557431 HUWE1Q7Z6Z7 4374 aaKnown RBP11.14□□□□□ -0.63
SLIRP-210ENST00000557431 LY6LH3BQJ8 138 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 ZNF44P15621 663 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 ERP29P30040 261 aaKnown RBP11.14□□□□□ -0.63
SLIRP-210ENST00000557431 POLR2IP36954 125 aaKnown RBP11.14□□□□□ -0.63
SLIRP-210ENST00000557431 RAB25P57735 213 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 ZNF85Q03923 595 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 HNF4GQ14541 408 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 ATP6AP1Q15904 470 aa11.14□□□□□ -0.63
SLIRP-210ENST00000557431 OR52W1Q6IF63 320 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms