RNA–Protein interactions for RNA: ENST00000557356.5

PSEN1-222, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-222ENST00000557356 SIRT4Q9Y6E7 314 aaPredicted RBP6.46□□□□□ -1.38
PSEN1-222ENST00000557356 DOCK11Q5JSL3 2073 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 TRGV10A0A0A0MS01 117 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 TRBV5-7A0A0A0MS05 114 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 A0A1B0GUS0 222 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 A0A1B0GW55 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 NPFFO15130 113 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ANGPTL7O43827 346 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 FCN3O75636 299 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR2H2O95918 312 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 CSN2P05814 226 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 RNASE1P07998 156 aaKnown RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L2P0CJ85 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L3P0CJ86 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L4P0CJ87 422 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L5P0CJ88 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L6P0CJ89 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L7P0CJ90 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ZNF728P0DKX0 622 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 GTF2F2P13984 249 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 SELLP14151 372 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ZNF44P15621 663 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 IGFBP3P17936 291 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 CRHBPP24387 322 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 NPBWR2P48146 333 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 PSMD7P51665 324 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ZP1P60852 638 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 UBA52P62987 128 aaKnown RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 SCN1BQ07699 218 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 IL13RA2Q14627 380 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 MED22Q15528 200 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ACSM3Q53FZ2 586 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DDI2Q5TDH0 399 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4L9Q6RFH8 374 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 C12orf54Q6X4T0 127 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 BRD3OSQ6XYD6 125 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 BCL6BQ8N143 479 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR52N4Q8NGI2 321 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR51A2Q8NGJ7 313 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR51T1Q8NGJ9 327 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR5D18Q8NGL1 313 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR5R1Q8NH85 324 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 UFD1Q92890 307 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 RFT1Q96AA3 541 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 PGLYRP3Q96LB9 341 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 CNBD2Q96M20 576 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 SPACA5Q96QH8 159 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ZNF184Q99676 751 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 UQCC2Q9BRT2 126 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 CCDC90BQ9GZT6 254 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 GAL3ST2Q9H3Q3 398 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 SPACA1Q9HBV2 294 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 RAB9BQ9NP90 201 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 C19orf12Q9NSK7 152 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 RBFOX1Q9NWB1 397 aaKnown RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 TAS2R4Q9NYW5 299 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 TAS2R3Q9NYW6 316 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 OR6C3Q9NZP0 311 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 DUX4Q9UBX2 424 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 ING4Q9UNL4 249 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 UBE2J1Q9Y385 318 aaPredicted RBP6.45□□□□□ -1.38
PSEN1-222ENST00000557356 LRRC42Q9Y546 428 aa6.45□□□□□ -1.38
PSEN1-222ENST00000557356 IGHV3OR16-10A0A075B7F0 116 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 IGKV1-12A0A0C4DH73 117 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 A0A0G2JK05 382 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 TMEM89A2RUT3 159 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 C17orf98A8MV24 154 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 F8VVB4 439 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 F8VWA3 439 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 GABRPO00591 440 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 DENRO43583 198 aaKnown RBP6.44□□□□□ -1.38
PSEN1-222ENST00000557356 ARL6IP5O75915 188 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 HTR3BO95264 441 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 LALBAP00709 142 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 IGKV1D-12P01611 117 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 UBBP0CG47 229 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 DUSP1P28562 367 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 CEBPDP49716 269 aaPredicted RBP6.44□□□□□ -1.38
PSEN1-222ENST00000557356 P2RX3P56373 397 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 RPS11P62280 158 aaKnown RBP eCLIP6.44□□□□□ -1.38
PSEN1-222ENST00000557356 TPBGQ13641 420 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 RBM39Q14498 530 aaKnown RBP6.44□□□□□ -1.38
PSEN1-222ENST00000557356 IRF3Q14653 427 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 AANATQ16613 207 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 MPV17LQ2QL34 196 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 DEFB112Q30KQ8 113 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 NHLRC3Q5JS37 347 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 GLT8D1Q68CQ7 371 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 UNQ9370/PRO34162Q6UXP9 181 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 C17orf107Q6ZR85 190 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 TRAPPC6BQ86SZ2 158 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 LDLRAD3Q86YD5 345 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 PHC2Q8IXK0 858 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 BATF2Q8N1L9 274 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 OSR2Q8N2R0 312 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 SVOPQ8N4V2 548 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 JAGN1Q8N5M9 183 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 Q8N7P7 452 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 ZFP41Q8N8Y5 198 aa6.44□□□□□ -1.38
PSEN1-222ENST00000557356 ZDHHC22Q8N966 263 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms