RNA–Protein interactions for RNA: ENST00000557269.5

SHMT2-227, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-227ENST00000557269 FIP1L1Q6UN15 594 aaKnown RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 C17orf107Q6ZR85 190 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 USP43Q70EL4 1123 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SLC36A1Q7Z2H8 476 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 OR4S1Q8NGB4 309 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 OR8B3Q8NGG8 313 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 OR5H6Q8NGV6 325 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 KCNG3Q8TAE7 436 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SLC25A46Q96AG3 418 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 RAB39BQ96DA2 213 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 MSI2Q96DH6 328 aaKnown RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 Q96M66 194 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 OR8B2Q96RD0 313 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SMR3AQ99954 134 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 NICN1Q9BSH3 213 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SHARPINQ9H0F6 387 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 SEBOXQ9HB31 216 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 YLPM1P49750 1951 aaKnown RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 ABCA2Q9BZC7 2435 aa10.64□□□□□ -0.71
SHMT2-227ENST00000557269 ZNF469Q96JG9 3925 aaPredicted RBP10.64□□□□□ -0.71
SHMT2-227ENST00000557269 TRAV24A0A0B4J272 114 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 SLC33A1O00400 549 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-227ENST00000557269 NDUFB3O43676 98 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 CHRM2P08172 466 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 ZNF44P15621 663 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 GABRR1P24046 479 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 LMO1P25800 156 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 OR3A1P47881 315 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 CAPZA1P52907 286 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 GNB2P62879 340 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 RPS27AP62979 156 aaKnown RBP10.63□□□□□ -0.71
SHMT2-227ENST00000557269 IL13RA2Q14627 380 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 FOXB2Q5VYV0 432 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 SIGIRRQ6IA17 410 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 NLRC3Q7RTR2 1065 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 OR2W3Q7Z3T1 314 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 ZNF561Q8N587 486 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 TMEM185AQ8NFB2 350 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 LGALS14Q8TCE9 139 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 MRPS24Q96EL2 167 aaKnown RBP10.63□□□□□ -0.71
SHMT2-227ENST00000557269 MED30Q96HR3 178 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 C18orf12Q96KH6 178 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 SSBP3Q9BWW4 388 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-227ENST00000557269 CHST6Q9GZX3 395 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 CST11Q9H112 138 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 LPAR5Q9H1C0 372 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 PCDHB16Q9NRJ7 776 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 SLC25A10Q9UBX3 287 aaPredicted RBP10.63□□□□□ -0.71
SHMT2-227ENST00000557269 FBLN5Q9UBX5 448 aa10.63□□□□□ -0.71
SHMT2-227ENST00000557269 CCDC160A6NGH7 325 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 C22orf46C9J442 243 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 K7N7A8 449 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 HSPB6O14558 160 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 OR7C1O76099 320 aaPredicted RBP10.62□□□□□ -0.71
SHMT2-227ENST00000557269 TK1P04183 234 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 INHBBP09529 407 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 CD99P14209 185 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 ESCO2Q56NI9 601 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 BPIFB2Q8N4F0 458 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
SHMT2-227ENST00000557269 ST8SIA4Q92187 359 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 BCL7BQ9BQE9 202 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 TM2D1Q9BX74 207 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 TMEM59Q9BXS4 323 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 PPA2Q9H2U2 334 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 MMP26Q9NRE1 261 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 CLN8Q9UBY8 286 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 GLS2Q9UI32 602 aa10.62□□□□□ -0.71
SHMT2-227ENST00000557269 FLNAP21333 2647 aaKnown RBP10.61□□□□□ -0.71
SHMT2-227ENST00000557269 MED13LQ71F56 2210 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 FOXI3A8MTJ6 420 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-227ENST00000557269 A8MXK9 166 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 SOCS1O15524 211 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 HEXAP06865 529 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 ZNF16P17020 682 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-227ENST00000557269 NDUFB7P17568 137 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 CPT2P23786 658 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 RORCP51449 518 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 PAX2Q02962 417 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 MPV17LQ2QL34 196 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 MOGAT2Q3SYC2 334 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 LRRC10Q5BKY1 277 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 BTN2A1Q7KYR7 527 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 FAM89BQ8N5H3 189 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 LINC01356Q8N9X3 169 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 SUMF2Q8NBJ7 301 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 DYNC2LI1Q8TCX1 351 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 DACT3Q96B18 629 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-227ENST00000557269 SLC25A38Q96DW6 304 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 SNX22Q96L94 193 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 IFT22Q9H7X7 185 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 C19orf12Q9NSK7 152 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 RSL24D1Q9UHA3 163 aaKnown RBP10.61□□□□□ -0.71
SHMT2-227ENST00000557269 RAB22AQ9UL26 194 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 CELSR1Q9NYQ6 3014 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 ARHGAP32A7KAX9 2087 aa10.61□□□□□ -0.71
SHMT2-227ENST00000557269 LOC105371242A0A075B767 164 aa10.6□□□□□ -0.71
SHMT2-227ENST00000557269 MEX3AA1L020 520 aaKnown RBP10.6□□□□□ -0.71
SHMT2-227ENST00000557269 B4DSR2 109 aa10.6□□□□□ -0.71
SHMT2-227ENST00000557269 NOL3O60936 208 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms