RNA–Protein interactions for RNA: ENST00000556898.5

ATXN3-244, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 990 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-244ENST00000556898 ELL3Q9HB65 397 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-244ENST00000556898 CBLN4Q9NTU7 201 aa4.45□□□□□ -1.7
ATXN3-244ENST00000556898 RBFOX1Q9NWB1 397 aaKnown RBP4.45□□□□□ -1.7
ATXN3-244ENST00000556898 PTTG2Q9NZH5 202 aa4.45□□□□□ -1.7
ATXN3-244ENST00000556898 AKAP6Q13023 2319 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 A0A075B6Q4 140 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 A0A1B0GW55 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 hCG_1807616A0A1W2PRN6 198 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 LRP5LA4QPB2 252 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM14DPA8MWL7 114 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 VSTM5A8MXK1 200 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FAM25AB3EWG3 89 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FAM25CB3EWG5 89 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FAM25GB3EWG6 89 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 J3QT63 122 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SOCS1O15524 211 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 RGS5O15539 181 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 TPD52L2O43399 206 aaKnown RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 CRTAPO75718 401 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 PTBP3O95758 552 aaKnown RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ERCC1P07992 297 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L2P0CJ85 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L3P0CJ86 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L4P0CJ87 422 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L5P0CJ88 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L6P0CJ89 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L7P0CJ90 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ARSBP15848 533 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 MPZP25189 248 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 TNFSF8P32971 234 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SOX6P35712 828 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 EVX1P49640 407 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SELENOVP59797 346 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SNRPD2P62316 118 aaKnown RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 RSU1Q15404 277 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 PIGYQ3MUY2 71 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 RNASE12Q5GAN4 147 aaKnown RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FAM76BQ5HYJ3 339 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 AGAP6Q5VW22 663 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 OLFML2AQ68BL7 652 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SFRP4Q6FHJ7 346 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 CNIH2Q6PI25 160 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4L9Q6RFH8 374 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ASCL4Q6XD76 172 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 C5orf24Q7Z6I8 188 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DTX2Q86UW9 622 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 CMTM4Q8IZR5 234 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FGFRL1Q8N441 504 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 FTMTQ8N4E7 242 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 GCSAMQ8N6F7 178 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SAMD12Q8N8I0 201 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 OR4M1Q8NGD0 313 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 OR5T2Q8NGG2 359 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 OR51F2Q8NH61 342 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 LRRC29Q8WV35 223 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 IGFBPL1Q8WX77 278 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DYRK2Q92630 601 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 GCDHQ92947 438 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ITFG2Q969R8 447 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 TECTBQ96PL2 329 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 UQCC2Q9BRT2 126 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 PKIBQ9C010 78 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SELENOIQ9C0D9 397 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SLC22A4Q9H015 551 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 METTL9Q9H1A3 318 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 LPAR5Q9H1C0 372 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 TLNRD1Q9H1K6 362 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 CYSLTR2Q9NS75 346 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 C14orf119Q9NWQ9 140 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ABRACLQ9P1F3 81 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 DUX4Q9UBX2 424 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 ELF5Q9UKW6 265 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-244ENST00000556898 SPATA2Q9UM82 520 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 COL6A5A8TX70 2615 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 HIVEP2P31629 2446 aa4.44□□□□□ -1.7
ATXN3-244ENST00000556898 STAB1Q9NY15 2570 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 FBN1P35555 2871 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 TMEM210A6NLX4 147 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 FOXI3A8MTJ6 420 aaPredicted RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SIRPB1O00241 398 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 GEMIN2O14893 280 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CLPXO76031 633 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 FCER2P06734 321 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CD55P08174 381 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ADH4P08319 380 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PGA5P0DJD9 388 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SELLP14151 372 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 MGMTP16455 207 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PRKACAP17612 351 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 GLRA1P23415 457 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 GABRR1P24046 479 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SRP9P49458 86 aaKnown RBP4.43□□□□□ -1.7
ATXN3-244ENST00000556898 VEGFCP49767 419 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PPOXP50336 477 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 PSMD7P51665 324 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 ERVK11-1P61568 191 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 CD83Q01151 205 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 SCN1BQ07699 218 aa4.43□□□□□ -1.7
ATXN3-244ENST00000556898 IL24Q13007 206 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms