RNA–Protein interactions for RNA: ENST00000556897.5

HNRNPC-227, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,252 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-227ENST00000556897 GDNFP39905 211 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 MNDAP41218 407 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 OR3A1P47881 315 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 SNU13P55769 128 aaKnown RBP7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 CDK5Q00535 292 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 ZNF91Q05481 1191 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 RBM39Q14498 530 aaKnown RBP7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 UBE2V2Q15819 145 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 ODF4Q2M2E3 257 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 HLA-DRB5Q30154 266 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 DEFB136Q30KP8 78 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 SPATS1Q496A3 300 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM98BQ52LJ0 330 aaKnown RBP7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 UTF1Q5T230 341 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 TMEM236Q5W0B7 351 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 ZNF322Q6U7Q0 402 aaPredicted RBP7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 C16orf89Q6UX73 402 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 HEPN1Q6WQI6 88 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 CREB3L1Q96BA8 519 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 APOL4Q9BPW4 351 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 GAL3ST2Q9H3Q3 398 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 MOB1AQ9H8S9 216 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 PLEKHA1Q9HB21 404 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 RBFOX1Q9NWB1 397 aaKnown RBP7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 OR52A1Q9UKL2 312 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 TMEM14AQ9Y6G1 99 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 R4GMQ9 66 aa7.12□□□□□ -1.27
HNRNPC-227ENST00000556897 DNAH7Q8WXX0 4024 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SORL1Q92673 2214 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SIRPB1O00241 398 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 OSMP13725 252 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 BCL3P20749 454 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 CCL1P22362 96 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 CD34P28906 385 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 NPBWR2P48146 333 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 FUT6P51993 359 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 GP2P55259 537 aaKnown RBP7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 CXCR4P61073 352 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SLC35B1P78383 322 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 AESQ08117 197 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 KPNB1Q14974 876 aaKnown RBP7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 CCDC144NLQ6NUI1 221 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 Q6ZSR3 168 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 TMEM179BQ7Z7N9 219 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 ENTHD1Q8IYW4 607 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM58AQ8N1B3 248 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 C5orf56Q8N8D9 126 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 OR56B4Q8NH76 319 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 CNN2Q99439 309 aaKnown RBP7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SEBOXQ9HB31 216 aaPredicted RBP7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 ARL8BQ9NVJ2 186 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 TAGLN3Q9UI15 199 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 GLS2Q9UI32 602 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SCOCQ9UIL1 159 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 SNX5Q9Y5X3 404 aa7.11□□□□□ -1.27
HNRNPC-227ENST00000556897 TRBV2A0A0J9YWF9 115 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 LCE6AA0A183 80 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A18PA6NE21 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A16PA6NEW6 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A20PA6NIJ5 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 LINC01548A6NM66 108 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A9PA6NNJ1 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A12PA8MX19 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A5PA8MXJ8 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 OOSP1A8MZH6 123 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 SEC14L6B5MCN3 397 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 SYT7O43581 403 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 ENTPD6O75354 484 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 GATBO75879 557 aaKnown RBP7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 RPP14O95059 124 aaKnown RBP7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 CST1P01037 141 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A15PP0C7V4 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A13PP0C7W8 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A14PP0C7W9 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 FAM90A24PP0C7X0 464 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRKACAP17612 351 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 CHATP28329 748 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 GLIPR1P48060 266 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 POU3F4P49335 361 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRRX1P54821 245 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 GYS2P54840 703 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 CDC42P60953 191 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRR20EP86478 221 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRR20CP86479 221 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRR20DP86480 221 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRR20BP86481 221 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 PRR20AP86496 221 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 MS4A2Q01362 244 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 GK3PQ14409 553 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 HES1Q14469 280 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 HNF4GQ14541 408 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 ZNF146Q15072 292 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 SPIN3Q5JUX0 258 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 C9orf66Q5T8R8 295 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 LCNL1Q6ZST4 164 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 SLC35E3Q7Z769 313 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 DHFR2Q86XF0 187 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 THNSL2Q86YJ6 484 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 Q8IYB0 196 aa7.1□□□□□ -1.27
HNRNPC-227ENST00000556897 HS3ST5Q8IZT8 346 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms