RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 PNPLA2Q96AD5 504 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 NTNG2Q96CW9 530 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 URB1-AS1Q96HZ7 61 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 PGLYRP3Q96LB9 341 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 BARHL1Q9BZE3 327 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 OR11A1Q9GZK7 315 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 SYT4Q9H2B2 425 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 ZNF665Q9H7R5 613 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 NIPAL2Q9H841 368 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 ISG20L2Q9H9L3 353 aaKnown RBP4.35□□□□□ -1.71
SRP54-211ENST00000556445 C1orf123Q9NWV4 160 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 PLEK2Q9NYT0 353 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 ABRACLQ9P1F3 81 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 DKKL1Q9UK85 242 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 FBXL4Q9UKA2 621 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 IKZF2Q9UKS7 526 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 FLVCR2Q9UPI3 526 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 TIMM10BQ9Y5J6 103 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 R4GN57 208 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 NCOR1O75376 2440 aa4.35□□□□□ -1.71
SRP54-211ENST00000556445 PCNX3Q9H6A9 2034 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 IGLV1-36A0A0B4J1U3 117 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF726A6NNF4 738 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 FAM25AB3EWG3 89 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 FAM25CB3EWG5 89 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 FAM25GB3EWG6 89 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF732B4DXR9 585 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF593O00488 134 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 RAD1O60671 282 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF354AO60765 605 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR2J3O76001 311 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 BRI3O95415 125 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 CD2P06729 351 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF43P17038 809 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 CNR1P21554 472 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 SHC1P29353 583 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 CD79BP40259 229 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 RFX2P48378 723 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 INPP1P49441 399 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 CYB561P49447 251 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 EVX1P49640 407 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 EFNB2P52799 333 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 UBE2G2P60604 165 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 PITPNAQ00169 270 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 POU3F1Q03052 451 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 MFGE8Q08431 387 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 SF3A2Q15428 464 aaKnown RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 MS4A18Q3C1V0 323 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 TMEM176BQ3YBM2 270 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 Q499Y3 187 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 PHLDA2Q53GA4 152 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF684Q5T5D7 378 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 TIGD3Q6B0B8 471 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 LRRN1Q6UXK5 716 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 C16orf47Q6ZP98 133 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 ASB18Q6ZVZ8 466 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZNF676Q8N7Q3 588 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 WDSUB1Q8N9V3 476 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 SUMF1Q8NBK3 374 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 C19orf18Q8NEA5 215 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 STXBP6Q8NFX7 210 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR11H4Q8NGC9 324 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR4D6Q8NGJ1 314 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR6X1Q8NH79 312 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZPLD1Q8TCW7 415 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 GPR148Q8TDV2 347 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 THEM6Q8WUY1 208 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ABTB1Q969K4 478 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 SLC25A44Q96H78 314 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 UHRF2Q96PU4 802 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR5B2Q96R09 309 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 OR8B4Q96RC9 309 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ATF6BQ99941 703 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 RERGLQ9H628 205 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 RNF121Q9H920 327 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 SH2D2AQ9NP31 389 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ABCB9Q9NP78 766 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 TIGARQ9NQ88 270 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ABCB10Q9NRK6 738 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 ZFP57Q9NU63 452 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 COMMD3Q9UBI1 195 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 B4GALT7Q9UBV7 327 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 BOKQ9UMX3 212 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 COPS3Q9UNS2 423 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 KPTNQ9Y664 436 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 COL27A1Q8IZC6 1860 aaPredicted RBP4.34□□□□□ -1.71
SRP54-211ENST00000556445 KIF26BQ2KJY2 2108 aa4.34□□□□□ -1.71
SRP54-211ENST00000556445 KMT2EQ8IZD2 1858 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TRBV5-5A0A0J9YX44 114 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 RPS10-NUDT3A0A1W2PQS6 291 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TVP23AA6NH52 213 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 H7C1C5 153 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 DCTN6O00399 190 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 GPR171O14626 319 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 TOR1AO14656 332 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 ZIC3O60481 467 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 APOC1P02654 83 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 IGF1P05019 195 aa4.33□□□□□ -1.72
SRP54-211ENST00000556445 UBCP0CG48 685 aaKnown RBP4.33□□□□□ -1.72
SRP54-211ENST00000556445 CCL3P10147 92 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms