RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 KDM4DQ6B0I6 523 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 OR2T5Q6IEZ7 315 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 ZFP1Q6P2D0 407 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 ERICH5Q6P6B1 374 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 OFCC1Q8IZS5 231 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 FTMTQ8N4E7 242 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 CD177Q8N6Q3 437 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 OR2T29Q8NH02 315 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 OR4Q3Q8NH05 313 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF671Q8TAW3 534 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 REEP6Q96HR9 211 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 TPD52L3Q96J77 140 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 RNF170Q96K19 258 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 NOL4LQ96MY1 436 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-236ENST00000556220 NMNAT3Q96T66 252 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 FGF23Q9GZV9 251 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-236ENST00000556220 ABCB9Q9NP78 766 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 RASL12Q9NYN1 266 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 DNAJB9Q9UBS3 223 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 HHLA2Q9UM44 414 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 TNFRSF18Q9Y5U5 241 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 SIRT4Q9Y6E7 314 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-236ENST00000556220 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
ATXN3-236ENST00000556220 IGHV2-26A0A0B4J1V2 119 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF850A8MQ14 1090 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 SLC1A7O00341 560 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 DENRO43583 198 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 WBP4O75554 376 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 RENP00797 406 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 CST4P01036 141 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 TK1P04183 234 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 PIPP12273 146 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 HIST1H1CP16403 213 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 FASP25445 335 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 RRM2P31350 389 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 RPS27P42677 84 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ACTA2P62736 377 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ACTG2P63267 376 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ACTC1P68032 377 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ACTA1P68133 377 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 SLC35B1P78383 322 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 PRDX4Q13162 271 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 APOFQ13790 326 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 IFI44LQ53G44 452 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 TEX38Q6PEX7 206 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ACP7Q6ZNF0 438 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ZBTB49Q6ZSB9 765 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 RRM2BQ7LG56 351 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 SATL1Q86VE3 508 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 TIGD4Q8IY51 512 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 OR4K13Q8NH42 304 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 GATAD1Q8WUU5 269 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 DNAJC9Q8WXX5 260 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ERMAPQ96PL5 475 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 ZNF184Q99676 751 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 SH3GL1Q99961 368 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 OR51I2Q9H344 312 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 RPRD1BQ9NQG5 326 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 PAPOLBQ9NRJ5 636 aaKnown RBP5.34□□□□□ -1.55
ATXN3-236ENST00000556220 CENPMQ9NSP4 180 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 DPM3Q9P2X0 92 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 TMEM5Q9Y2B1 443 aa5.34□□□□□ -1.55
ATXN3-236ENST00000556220 OR6C68A6NDL8 312 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 TRIM64CA6NLI5 447 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 SERPINE3A8MV23 424 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF732B4DXR9 585 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 PRR23D1E9PI22 279 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-236ENST00000556220 ARPC3O15145 178 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 SLC25A17O43808 307 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 CST1P01037 141 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 GASTP01350 101 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 FABP3P05413 133 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 ANXA2P07355 339 aaKnown RBP5.33□□□□□ -1.56
ATXN3-236ENST00000556220 PRR23D2P0DMB1 279 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-236ENST00000556220 GP9P14770 177 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 OMPP47874 163 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 CDX1P47902 265 aaPredicted RBP5.33□□□□□ -1.56
ATXN3-236ENST00000556220 GPM6AP51674 278 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 ARHGDIBP52566 201 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 EFNB1P98172 346 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 FHL3Q13643 280 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 SNAPC1Q16533 368 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 SMIM21Q3B7S5 101 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 TMEM236Q5W0B7 351 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 PRSS45Q7RTY3 260 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 DCXRQ7Z4W1 244 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 ZNF429Q86V71 674 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 DRAM1Q8N682 238 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 OR4P4Q8NGL7 312 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 OR52J3Q8NH60 311 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 HPSE2Q8WWQ2 592 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 LINC00476Q8WZB0 136 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 PIGCQ92535 297 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 SLAMF6Q96DU3 332 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 HIST1H2AAQ96QV6 131 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 OR8B4Q96RC9 309 aa5.33□□□□□ -1.56
ATXN3-236ENST00000556220 FEVQ99581 238 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms