RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 SPACA1Q9HBV2 294 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 CA10Q9NS85 328 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 MTCH1Q9NZJ7 389 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 RCC2Q9P258 522 aaKnown RBP7.08□□□□□ -1.28
ATXN3-235ENST00000556082 AK3Q9UIJ7 227 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 ANXA10Q9UJ72 324 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 MGAT4AQ9UM21 535 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 FAM215AQ9Y5M1 114 aa7.08□□□□□ -1.28
ATXN3-235ENST00000556082 TNRC6AQ8NDV7 1962 aaKnown RBP7.08□□□□□ -1.28
ATXN3-235ENST00000556082 CACNA1GO43497 2377 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 TRBV6-6A0A0A6YYG2 114 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 PLSCR5A0PG75 271 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 C9orf170A2RU37 121 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 LRP5LA4QPB2 252 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 HMSDA8MTL9 139 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 TRAPPC2LH3BP13 241 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 J3QT63 122 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 ZNHIT1O43257 154 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 CD8AP01732 235 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 CSN2P05814 226 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 CELA3BP08861 270 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 C4BPBP20851 252 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 KITLGP21583 273 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 IL32P24001 234 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 UCNP55089 124 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 TSPAN5P62079 268 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 IL13RA2Q14627 380 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 PIGYQ3MUY2 71 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 TIMM23BQ5SRD1 257 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 LCE4AQ5TA78 99 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF660Q6AZW8 331 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 OR2T2Q6IF00 324 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 C3P1Q6ZMU1 363 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 BHLHA15Q7RTS1 189 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 TMED4Q7Z7H5 227 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 CXorf67Q86X51 503 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 Q8IYB0 196 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 UXS1Q8NBZ7 420 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 OR13G1Q8NGZ3 307 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 GRPEL2Q8TAA5 225 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 MARS2Q96GW9 593 aaKnown RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 RTL8AQ9BWD3 113 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 BCL2L14Q9BZR8 327 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 OR2J1Q9GZK6 312 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 FN3KRPQ9HA64 309 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 C12orf4Q9NQ89 552 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 PLSCR3Q9NRY6 295 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF629Q9UEG4 869 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 OPN4Q9UHM6 478 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF230Q9UIE0 474 aaPredicted RBP7.07□□□□□ -1.28
ATXN3-235ENST00000556082 DUSP13Q9UII6 198 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 HSPB11Q9Y547 144 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 SLC25A15Q9Y619 301 aa7.07□□□□□ -1.28
ATXN3-235ENST00000556082 PTPRZ1P23471 2315 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 MED12LQ86YW9 2145 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 IGKV1D-8A0A087WSZ0 117 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 TMEM210A6NLX4 147 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 F5H5P2 479 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 NOS1APO75052 506 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 SLC22A5O76082 557 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 NAPSAO96009 420 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PLATP00750 562 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 HLA-AP01891 365 aaKnown RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 FCGR3AP08637 254 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 GLI4P10075 376 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PPP3CBP16298 524 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 BCL3P20749 454 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 CA6P23280 308 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 CD34P28906 385 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 NPBWR2P48146 333 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 TDGF1P3P51864 188 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 H2BFSP57053 126 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 GMFBP60983 142 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 ERVK11-1P61568 191 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 IL13RA1P78552 427 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PSG7Q13046 419 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PPP1R1AQ13522 171 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 C2orf68Q2NKX9 166 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 LGALSLQ3ZCW2 172 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 MBNL2Q5VZF2 373 aaKnown RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 LIN54Q6MZP7 749 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 TMEM65Q6PI78 240 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 HAGHLQ6PII5 290 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF474Q6S9Z5 364 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 ZNF767PQ75MW2 155 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 SSX8Q7RTT4 187 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 MYPOPQ86VE0 399 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 SPERTQ8NA61 448 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 OR8G5Q8NG78 346 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 OR5M8Q8NGP6 311 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 OR1J1Q8NGS3 322 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 SLC25A40Q8TBP6 338 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 MARCH1Q8TCQ1 289 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 KLF14Q8TD94 323 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PHB2Q99623 299 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 RTBDNQ9BSG5 229 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 OPN3Q9H1Y3 402 aaPredicted RBP7.06□□□□□ -1.28
ATXN3-235ENST00000556082 PIGMQ9H3S5 423 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 C5orf66Q9H5L9 145 aa7.06□□□□□ -1.28
ATXN3-235ENST00000556082 NECAP2Q9NVZ3 263 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms