RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 ELL3Q9HB65 397 aaPredicted RBP5.84□□□□□ -1.47
SLIRP-204ENST00000555890 CDH20Q9HBT6 801 aa5.84□□□□□ -1.47
SLIRP-204ENST00000555890 NOX3Q9HBY0 568 aa5.84□□□□□ -1.47
SLIRP-204ENST00000555890 NUDT15Q9NV35 164 aa5.84□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF221Q9UK13 617 aa5.84□□□□□ -1.47
SLIRP-204ENST00000555890 ALG5Q9Y673 324 aa5.84□□□□□ -1.47
SLIRP-204ENST00000555890 TRAV6A0A075B6T7 132 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 ANKRD30BLA7E2S9 258 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 ZNF736B4DX44 427 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 DISC1C4P0D8 188 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 BOLA2-SMG1P6H3BVE0 249 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 WISP2O76076 250 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 RAB3DO95716 219 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CYB5AP00167 134 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CST4P01036 141 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CCL2P13500 99 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CBR1P16152 277 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MGMTP16455 207 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 SERPINA2P20848 420 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CPT2P23786 658 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CBX5P45973 191 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 CCR6P51684 374 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 GNG2P59768 71 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 RPS27AP62979 156 aaKnown RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 PRDX4Q13162 271 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 GK2Q14410 553 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MEF2DQ14814 521 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 PPA1Q15181 289 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MOGAT2Q3SYC2 334 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 NKAPLQ5M9Q1 402 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 STEAP1BQ6NZ63 245 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 ASCL4Q6XD76 172 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 TRAPPC6BQ86SZ2 158 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MDP1Q86V88 176 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 GABRG1Q8N1C3 465 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 C17orf78Q8N4C9 275 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 FAM89BQ8N5H3 189 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 ZSCAN4Q8NAM6 433 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 DRAXINQ8NBI3 349 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 PXT1Q8NFP0 134 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 OR5D18Q8NGL1 313 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 FAM57AQ8TBR7 257 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 DACT3Q96B18 629 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MBD6Q96DN6 1003 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MRPS24Q96EL2 167 aaKnown RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 RNF170Q96K19 258 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 C1orf147Q96MC9 270 aaPredicted RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 TM2D1Q9BX74 207 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MED28Q9H204 178 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 BANF2Q9H503 90 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 MOV10Q9HCE1 1003 aaKnown RBP5.83□□□□□ -1.48
SLIRP-204ENST00000555890 IFT46Q9NQC8 304 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 NKIRAS2Q9NYR9 191 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 PTTG3PQ9NZH4 202 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 STARD10Q9Y365 291 aa5.83□□□□□ -1.48
SLIRP-204ENST00000555890 C7orf66A4D0T2 115 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 MEIS3P1A6NDR6 274 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZNF503-AS2A6NEH8 195 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TMEM235A6NFC5 223 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZNF850A8MQ14 1090 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 PRRG2O14669 202 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 SOCS1O15524 211 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZNHIT1O43257 154 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 AKR7A2O43488 359 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 CA11O75493 328 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 LYZL6O75951 148 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 NDUFB6O95139 128 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 NGFP01138 241 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 CD3DP04234 171 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 GYPEP15421 78 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 HIST1H1DP16402 221 aaKnown RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 SELEP16581 610 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZNF14P17017 642 aaPredicted RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TBPP20226 339 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 COX5AP20674 150 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TUBG1P23258 451 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 BLVRBP30043 206 aaPredicted RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TIMP3P35625 211 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZP1P60852 638 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 RRAS2P62070 204 aaPredicted RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 FOXF2Q12947 444 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 PDZK1IP1Q13113 114 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TNK1Q13470 666 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ARFRP1Q13795 201 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 RBMS2Q15434 407 aaKnown RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 CEACAM21Q3KPI0 293 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 RNASE10Q5GAN6 216 aaKnown RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 C1QTNF12Q5T7M4 302 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 METTL11BQ5VVY1 283 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 VWA1Q6PCB0 445 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 C12orf54Q6X4T0 127 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 MEX3BQ6ZN04 569 aaKnown RBP5.82□□□□□ -1.48
SLIRP-204ENST00000555890 RNF144BQ7Z419 303 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 C1QL2Q7Z5L3 287 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 MOGAT3Q86VF5 341 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 ZDHHC23Q8IYP9 409 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 SAXO1Q8IYX7 474 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 TMEM104Q8NE00 496 aa5.82□□□□□ -1.48
SLIRP-204ENST00000555890 OR56B2PQ8NGI1 322 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms