RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 CLDN25C9JDP6 229 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF878C9JN71 531 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DNASE2O00115 360 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 UPK1AO00322 258 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 CRXO43186 299 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 MBTPS2O43462 519 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 RAD51CO43502 376 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF354AO60765 605 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 TBL1XO60907 577 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SCO1O75880 301 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ATG12O94817 140 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 GADD45GO95257 159 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 RLN2P04090 185 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FGF1P05230 155 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 KLK1P06870 262 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L2P0CJ85 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L3P0CJ86 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L4P0CJ87 422 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L5P0CJ88 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L6P0CJ89 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4L7P0CJ90 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 CD37P11049 281 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 IL7P13232 177 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ABOP16442 354 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 USF1P22415 310 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SHC1P29353 583 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 MDH2P40926 338 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OR3A4PP47883 348 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 LGALS7P47929 136 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 RORCP51449 518 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 GPM6AP51674 278 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DLX6P56179 175 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 PIGPP57054 158 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 STXBP1P61764 594 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 BAXQ07812 192 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 BCL2L1Q07817 233 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 TCP10Q12799 353 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OR2F1Q13607 317 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 MAD2L1BPQ15013 274 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SURF2Q15527 256 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SNRNP35Q16560 246 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 HIST3H3Q16695 136 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 Q1RN00 199 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OCIAD2Q56VL3 154 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 TMEM69Q5SWH9 247 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 AVPI1Q5T686 147 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 GLYATQ6IB77 296 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 C11orf71Q6IPW1 123 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DCUN1D2Q6PH85 259 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SCIMPQ6UWF3 145 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 TMPPEQ6ZT21 453 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FA2HQ7L5A8 372 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 PDZD9Q8IXQ8 264 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 TCTE3Q8IZS6 198 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC39A11Q8N1S5 342 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF676Q8N7Q3 588 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF557Q8N988 423 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 CHST4Q8NCG5 386 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC30A7Q8NEW0 376 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OR52E4Q8NGH9 312 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OR6K6Q8NGW6 343 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 OR2AE1Q8NHA4 323 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SPPL2BQ8TCT7 592 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 GTSF1Q8WW33 167 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FGF11Q92914 225 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 RAB8BQ92930 207 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 RPEQ96AT9 228 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FLYWCH2Q96CP2 140 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 IMP4Q96G21 291 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SMIM8Q96KF7 97 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SIGLEC12Q96PQ1 595 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 KLF6Q99612 283 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 KIR2DL4Q99706 377 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 C20orf144Q9BQM9 153 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FAIM2Q9BWQ8 316 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DSN1Q9H410 356 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 EFCAB1Q9HAE3 211 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 FAM49BQ9NUQ9 324 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 VPS29Q9UBQ0 182 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 DUX4Q9UBX2 424 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ZNF223Q9UK11 482 aaPredicted RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 MCTS1Q9ULC4 181 aaKnown RBP2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SLC17A4Q9Y2C5 497 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 SIGLEC9Q9Y336 463 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 UFC1Q9Y3C8 167 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 V9GYS6 101 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 PCNX3Q9H6A9 2034 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 AKAP12Q02952 1782 aa2.28□□□□□ -2.04
MTHFD1-212ENST00000555858 ADAMTS12P58397 1594 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 ADGRL2O95490 1459 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 MAGI2Q86UL8 1455 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 PLEKHH2Q8IVE3 1493 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 MLH3Q9UHC1 1453 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 HFM1A2PYH4 1435 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 PTPRJQ12913 1337 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 IGKV1D-8A0A087WSZ0 117 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 A0A0A6YYD5 115 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 BORCS7-ASMTA0A0B4J1R7 106 aa2.27□□□□□ -2.05
MTHFD1-212ENST00000555858 ANKRD20A5PA0PJZ0 165 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms