RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ST3GAL3Q11203 375 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 KLRB1Q12918 225 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 TPBGQ13641 420 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 GRB7Q14451 532 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 MAPK14Q16539 360 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 GSG1Q2KHT4 349 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 LINC01620Q4KN68 170 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 FAM78AQ5JUQ0 283 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 RBM48Q5RL73 367 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 C22orf42Q6IC83 251 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 UFSP1Q6NVU6 142 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 ZNF836Q6ZNA1 936 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 FAM220AQ7Z4H9 259 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 HSD11B1LQ7Z5J1 315 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 TMEM144Q7Z5S9 345 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 IFNEQ86WN2 208 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 APRG1Q8IVJ8 170 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 BPIFB2Q8N4F0 458 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 JAGN1Q8N5M9 183 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 TSTD1Q8NFU3 115 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 OR9A2Q8NGT5 310 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 GRPEL2Q8TAA5 225 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 FAM45AQ8TCE6 357 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 C16orf78Q8WTQ4 265 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 CASTOR1Q8WTX7 329 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 NDRG1Q92597 394 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 C18orf25Q96B23 403 aaPredicted RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 FAF2Q96CS3 445 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 TMEM80Q96HE8 168 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 SFRP2Q96HF1 295 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 C19orf24Q9BVV8 132 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 DEFB126Q9BYW3 111 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 NAT10Q9H0A0 1025 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 DHX35Q9H5Z1 703 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 TMBIM4Q9HC24 238 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 IFT46Q9NQC8 304 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 PRSS16Q9NQE7 514 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 MAT2BQ9NZL9 334 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 GNG12Q9UBI6 72 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 SLC2A6Q9UGQ3 507 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 VSIG4Q9Y279 399 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 L3MBTL1Q9Y468 752 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 MYH11P35749 1972 aa2.45□□□□□ -2.02
SRP54-209ENST00000555746 ZNF638Q14966 1978 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 MDC1Q14676 2089 aaKnown RBP2.45□□□□□ -2.02
SRP54-209ENST00000555746 ZNF106Q9H2Y7 1883 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 MYO5AQ9Y4I1 1855 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 A0A1W2PPE3 182 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 FAM92AA1XBS5 289 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 VSTM2BA6NLU5 285 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PP2D1A8MPX8 630 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 DCTN6O00399 190 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CXCR6O00574 342 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 KPNA4O00629 521 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 SLC31A1O15431 190 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PSTPIP1O43586 416 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PLIN3O60664 434 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 HPGDSO60760 199 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CCDC22O60826 627 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 HLA-HP01893 362 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ORM1P02763 201 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ALDOBP05062 364 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 KLK3P07288 261 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 P0C879 139 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CELP19835 753 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 FUT3P21217 361 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ATP6V1B2P21281 511 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 GABRR1P24046 479 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 IVDP26440 423 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 RPL5P46777 297 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 CSNK1A1P48729 337 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TTPAP49638 278 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 PRLHRP49683 370 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 EIF2B2P49770 351 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 DAP3P51398 398 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 CAV2P51636 162 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 OR2B8PP59922 312 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 OSTNP61366 133 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 NUTF2P61970 127 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 RANP62826 216 aaKnown RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 MLLT11Q13015 90 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 DGUOKQ16854 277 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 GGTA1PQ4G0N0 100 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ZNF658BQ4V348 819 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 TNFAIP8L3Q5GJ75 292 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 FAM120AOSQ5T036 256 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TPRG1LQ5T0D9 272 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 RSBN1Q5VWQ0 802 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 DHRS4L2Q6PKH6 230 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 DRAM2Q6UX65 266 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ANKRD37Q7Z713 158 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 TMEM135Q86UB9 458 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 ZNF589Q86UQ0 364 aaPredicted RBP2.44□□□□□ -2.02
SRP54-209ENST00000555746 ANGPTL5Q86XS5 388 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CLDN19Q8N6F1 224 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 CLDN22Q8N7P3 220 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 LFNGQ8NES3 379 aa2.44□□□□□ -2.02
SRP54-209ENST00000555746 NOXO1Q8NFA2 376 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms