RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 GRK1Q15835 563 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 AWAT1Q58HT5 328 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 Q6P435 159 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 C16orf87Q6PH81 154 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 IZUMO2Q6UXV1 221 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
SNX6-203ENST00000555416 GDPD3Q7L5L3 318 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 SATL1Q86VE3 508 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 SLC25A28Q96A46 364 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 OR5M11Q96RB7 305 aa11.15□□□□□ -0.62
SNX6-203ENST00000555416 LSM2Q9Y333 95 aaKnown RBP11.15□□□□□ -0.62
SNX6-203ENST00000555416 FAM181BA6NEQ2 426 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 C17orf98A8MV24 154 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 CDRT1O95170 752 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 CELP19835 753 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 MYF6P23409 242 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 OMGP23515 440 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 COX7A1P24310 79 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 IER3P46695 156 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 RELBQ01201 579 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 GUCA2AQ02747 115 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 SCN1BQ07699 218 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 MED21Q13503 144 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 BLMHQ13867 455 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 IRF3Q14653 427 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 TAF9Q16594 264 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 SPIN3Q5JUX0 258 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 C12orf54Q6X4T0 127 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 ASCL4Q6XD76 172 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 LDLRAD3Q86YD5 345 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 ZSCAN4Q8NAM6 433 aaPredicted RBP11.14□□□□□ -0.63
SNX6-203ENST00000555416 TNFAIP8L1Q8WVP5 186 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 OR14A2Q96R54 314 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 ANKRD60Q9BZ19 345 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 PPA2Q9H2U2 334 aa11.14□□□□□ -0.63
SNX6-203ENST00000555416 EXOSC4Q9NPD3 245 aaKnown RBP11.14□□□□□ -0.63
SNX6-203ENST00000555416 A0A0G2JK05 382 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 MEIOCA2RUB1 952 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 SLC33A1O00400 549 aaPredicted RBP11.13□□□□□ -0.63
SNX6-203ENST00000555416 SH2D1BO14796 132 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 MYL12BO14950 172 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 MMP23AO75900 390 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 ATP6V1G2O95670 118 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 ALDOBP05062 364 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 CD2P06729 351 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 LMO1P25800 156 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 CFPP27918 469 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 SLC35A2P78381 396 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 PIGYQ3MUY2 71 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 Q499Y3 187 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 YIF1BQ5BJH7 314 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 LDLRAD2Q5SZI1 272 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 DDI2Q5TDH0 399 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 NCR3LG1Q68D85 454 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 FIP1L1Q6UN15 594 aaKnown RBP11.13□□□□□ -0.63
SNX6-203ENST00000555416 BAIAP2L2Q6UXY1 529 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 PXT1Q8NFP0 134 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 OR5D13Q8NGL4 314 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 SSMEM1Q8WWF3 244 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 COQ2Q96H96 371 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 NR1H4Q96RI1 486 aaPredicted RBP11.13□□□□□ -0.63
SNX6-203ENST00000555416 GPER1Q99527 375 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 CDCA4Q9BXL8 241 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 ZMAT3Q9HA38 289 aaKnown RBP11.13□□□□□ -0.63
SNX6-203ENST00000555416 TMEM138Q9NPI0 162 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 ZNRD1Q9P1U0 126 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 FBN3Q75N90 2809 aa11.13□□□□□ -0.63
SNX6-203ENST00000555416 MGST3O14880 152 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 GPX5O75715 221 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 ZNF44P15621 663 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 EEF1B2P24534 225 aaKnown RBP11.12□□□□□ -0.63
SNX6-203ENST00000555416 BDKRB2P30411 391 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 PTGFRP43088 359 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 GLIPR1P48060 266 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 GP2P55259 537 aaKnown RBP11.12□□□□□ -0.63
SNX6-203ENST00000555416 P2RX3P56373 397 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 TAS2R43P59537 309 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 MEF2CQ06413 473 aaPredicted RBP11.12□□□□□ -0.63
SNX6-203ENST00000555416 AESQ08117 197 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 FAM27D1Q5T7N8 215 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 RNLSQ5VYX0 342 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 ELP2Q6IA86 826 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 LHFPL4Q7Z7J7 247 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 DYNAPQ8N1N2 210 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 Q8NFD4 153 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 TBC1D15Q8TC07 691 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 CYYR1Q96J86 154 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 DERL3Q96Q80 235 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 ZNF184Q99676 751 aaPredicted RBP11.12□□□□□ -0.63
SNX6-203ENST00000555416 FAM192AQ9GZU8 254 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 DUSP21Q9H596 190 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 ING3Q9NXR8 418 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 ERGIC3Q9Y282 383 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 SF3B6Q9Y3B4 125 aaKnown RBP11.12□□□□□ -0.63
SNX6-203ENST00000555416 FAM96BQ9Y3D0 163 aa11.12□□□□□ -0.63
SNX6-203ENST00000555416 KIAA2026Q5HYC2 2103 aa11.11□□□□□ -0.63
SNX6-203ENST00000555416 TRAV24A0A0B4J272 114 aa11.11□□□□□ -0.63
SNX6-203ENST00000555416 A0A1W2PP11 408 aa11.11□□□□□ -0.63
SNX6-203ENST00000555416 H0YHG0 523 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms