RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 STK40Q8N2I9 435 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 CCNYL1Q8N7R7 359 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 SPANXA2-OT1Q8N9U9 137 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 ATP6V1C2Q8NEY4 427 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 OR2M7Q8NG81 312 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 ZNF420Q8TAQ5 688 aaPredicted RBP3.07□□□□□ -1.92
VRK1-205ENST00000555402 RNASEH2CQ8TDP1 164 aaKnown RBP3.07□□□□□ -1.92
VRK1-205ENST00000555402 WDR34Q96EX3 536 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 SMIM8Q96KF7 97 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 IP6K3Q96PC2 410 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 ING2Q9H160 280 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 C12orf4Q9NQ89 552 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 IFT46Q9NQC8 304 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 NLE1Q9NVX2 485 aaPredicted RBP3.07□□□□□ -1.92
VRK1-205ENST00000555402 ANXA10Q9UJ72 324 aa3.07□□□□□ -1.92
VRK1-205ENST00000555402 A0A1W2PQ67 120 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 OR6C70A6NIJ9 312 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 SMIM23A6NLE4 172 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 LGALS9O00182 355 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 DEXIO95424 95 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 PSMG1O95456 288 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 OR4Q2P0C623 313 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 PSKH1P11801 424 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 MLNP12872 115 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 SCN1AP35498 2009 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 MAGOHP61326 146 aaKnown RBP3.06□□□□□ -1.92
VRK1-205ENST00000555402 MED21Q13503 144 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 FLOT2Q14254 428 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 SHHQ15465 462 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 FBXL19-AS1Q494R0 122 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 ZCCHC6Q5VYS8 1495 aaKnown RBP3.06□□□□□ -1.92
VRK1-205ENST00000555402 MED27Q6P2C8 311 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 ZNF561Q8N587 486 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 OR5AK3PQ8NH89 298 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 C22orf15Q8WYQ4 148 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 RMI2Q96E14 147 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 YIPF6Q96EC8 236 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 MAP3K5Q99683 1374 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 PRORYQ9H606 182 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 CA10Q9NS85 328 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 ATPIF1Q9UII2 106 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 FBXL3Q9UKT7 428 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 PRELID1Q9Y255 219 aa3.06□□□□□ -1.92
VRK1-205ENST00000555402 NUP153P49790 1475 aaKnown RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 ABCB11O95342 1321 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 TMEM72A0PK05 275 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 K7EM74 188 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 PLPP3O14495 311 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 GPR171O14626 319 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 OR7C2O60412 319 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 IGKV1D-16P01601 117 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 SERPINA6P08185 405 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 OCM2P0CE71 109 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 COX5BP10606 129 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 NELFEP18615 380 aaKnown RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 NTF3P20783 257 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 ACTR1BP42025 376 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 RPL14P50914 215 aaKnown RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 ELF3P78545 371 aaPredicted RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 PRKCDQ05655 676 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 GUSBP1Q15486 140 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 BSXQ3C1V8 233 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 RBM48Q5RL73 367 aaKnown RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 MTERF4Q7Z6M4 381 aaKnown RBP3.05□□□□□ -1.92
VRK1-205ENST00000555402 ITPRIPQ8IWB1 547 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 CYP4Z2PQ8N1L4 340 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 TMEM156Q8N614 296 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 SLC35G3Q8N808 338 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 ST20-AS1Q8NBB2 130 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 APCDD1LQ8NCL9 501 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 OR4K2Q8NGD2 314 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 OR51Q1Q8NH59 317 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 RILPQ96NA2 401 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 DERL2Q9GZP9 239 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 ASCL3Q9NQ33 180 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 RBM22Q9NW64 420 aaKnown RBP eCLIP3.05□□□□□ -1.92
VRK1-205ENST00000555402 RWDD2AQ9UIY3 292 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 C3orf18Q9UK00 162 aa3.05□□□□□ -1.92
VRK1-205ENST00000555402 KIAA0232Q92628 1395 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 ELP1O95163 1332 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 RPP14O95059 124 aaKnown RBP3.04□□□□□ -1.92
VRK1-205ENST00000555402 SNAP29O95721 258 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 IGKV1-39P01597 117 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 RLN2P04090 185 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 IGKV1D-39P04432 117 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 MPIP34949 423 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 COILP38432 576 aaPredicted RBP3.04□□□□□ -1.92
VRK1-205ENST00000555402 CEBPGP53567 150 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 B2MP61769 119 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 ATP5G2Q06055 141 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 RAB31Q13636 194 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 MIR7-3HGQ8N6C7 128 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 OR8G5Q8NG78 346 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 DEDD2Q8WXF8 326 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 RORBQ92753 470 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 DERL3Q96Q80 235 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 C9orf16Q9BUW7 83 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 C1orf50Q9BV19 199 aa3.04□□□□□ -1.92
VRK1-205ENST00000555402 METTL8Q9H825 291 aaKnown RBP3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms