RNA–Protein interactions for RNA: ENST00000555386.5

PSEN1-213, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-213ENST00000555386 CNTD2Q9H8S5 307 aa8.38□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF701Q9NV72 531 aaPredicted RBP8.38□□□□□ -1.07
PSEN1-213ENST00000555386 SLC2A8Q9NY64 477 aa8.38□□□□□ -1.07
PSEN1-213ENST00000555386 PIPOXQ9P0Z9 390 aa8.38□□□□□ -1.07
PSEN1-213ENST00000555386 FLNAP21333 2647 aaKnown RBP8.37□□□□□ -1.07
PSEN1-213ENST00000555386 LINC00862A6NCI5 91 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 HMSDA8MTL9 139 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 C17orf100A8MU93 164 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF736B4DX44 427 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-213ENST00000555386 DISC1C4P0D8 188 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 H0YL77 283 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 H3BUI4 141 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 RAB27BO00194 218 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 XRCC2O43543 280 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 CDC14BO60729 498 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 NOS1APO75052 506 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-213ENST00000555386 RLN1P04808 185 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 UBBP0CG47 229 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 VSIG10L2P0DP72 767 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 PPOXP50336 477 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 TSPAN5P62079 268 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF260Q3ZCT1 412 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 FBXW12Q6X9E4 464 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 C1orf174Q8IYL3 243 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 FTMTQ8N4E7 242 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF525Q8N782 197 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 WFDC11Q8NEX6 87 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 OR56B2PQ8NGI1 322 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 OR4D10Q8NGI6 311 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 OR52H1Q8NGJ2 320 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 OR51E1Q8TCB6 317 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 ADAT3Q96EY9 351 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-213ENST00000555386 FAM71F1Q96KD3 344 aaPredicted RBP8.37□□□□□ -1.07
PSEN1-213ENST00000555386 Q96MF0 132 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 PRRT1Q99946 306 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 FOXC2Q99958 501 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 SOX7Q9BT81 388 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 MS4A5Q9H3V2 200 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 KCNK15Q9H427 330 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 DECR2Q9NUI1 292 aa8.37□□□□□ -1.07
PSEN1-213ENST00000555386 TMEM82A0PJX8 343 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 CD300LBA8K4G0 201 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 TMEM14DPA8MWL7 114 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 RNF223E7ERA6 249 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 J3QW42 95 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 LMX1BO60663 402 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 TSC22D2O75157 780 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 IGHV1-46P01743 117 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 DAOP14920 347 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 KITLGP21583 273 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 CA6P23280 308 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF93P35789 620 aaPredicted RBP8.36□□□□□ -1.07
PSEN1-213ENST00000555386 EFNA4P52798 201 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 CLEC12BQ2HXU8 276 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 SPRNQ5BIV9 151 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 THOC7Q6I9Y2 204 aaKnown RBP8.36□□□□□ -1.07
PSEN1-213ENST00000555386 LPCAT3Q6P1A2 487 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 IDO2Q6ZQW0 420 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 Q6ZR03 302 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 Q6ZSR3 168 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 OR2AK2Q8NG84 335 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 OR52N4Q8NGI2 321 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 KCNG3Q8TAE7 436 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 C10orf35Q96D05 121 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 ELMOD3Q96FG2 381 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 LYZL4Q96KX0 146 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 GPR84Q9NQS5 396 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 TMEM100Q9NV29 134 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 GHRLQ9UBU3 117 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 UBQLN2Q9UHD9 624 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 AUP1Q9Y679 476 aa8.36□□□□□ -1.07
PSEN1-213ENST00000555386 A0A0U1RQV5 110 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 IQCF6A8MYZ5 107 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 F5H5P2 479 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 SMAD7O15105 426 aaKnown RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 IGLV3-1P01715 115 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 AMY2AP04746 511 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 GSTP1P09211 210 aaKnown RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 ZNF735P0CB33 412 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 VSIG8P0DPA2 414 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 SELEP16581 610 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 TUBG1P23258 451 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 NFYAP23511 347 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 GMFBP60983 142 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 TNFAIP6P98066 277 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 FAM3AP98173 230 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 TAGLNQ01995 201 aaKnown RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 UNC119Q13432 240 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 ESCO2Q56NI9 601 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 DMRTC1Q5HYR2 192 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 CLLU1Q5K131 121 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 CLVS2Q5SYC1 327 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 AWAT2Q6E213 333 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 FAHD2BQ6P2I3 314 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 CLEC2AQ6UVW9 174 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 MUC20Q8N307 709 aaPredicted RBP8.35□□□□□ -1.07
PSEN1-213ENST00000555386 ZDHHC22Q8N966 263 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 OR8G5Q8NG78 346 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 OR13C9Q8NGT0 318 aa8.35□□□□□ -1.07
PSEN1-213ENST00000555386 OR10R2Q8NGX6 335 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms