RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR13C9Q8NGT0 318 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 CORO2AQ92828 525 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 AMBNQ9NP70 447 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 MINOS1-NBL1R4GNA1 71 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 HSPE1-MOB4S4R3N1 261 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 MGAM2Q2M2H8 2515 aa9.61□□□□□ -0.87
VRK1-204ENST00000555351 PSPNO60542 156 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 CD2P06729 351 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 PIPP12273 146 aaPredicted RBP9.6□□□□□ -0.87
VRK1-204ENST00000555351 OR3A1P47881 315 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 MTNR1BP49286 362 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 P2RX3P56373 397 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 MED21Q13503 144 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 KISS1Q15726 138 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 ELP2Q6IA86 826 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 OR52W1Q6IF63 320 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 TCF23Q7RTU1 214 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 Q8NFD4 153 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 PXT1Q8NFP0 134 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 GPR148Q8TDV2 347 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 GAL3ST2Q9H3Q3 398 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 NCOR1P1Q9H4R4 102 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
VRK1-204ENST00000555351 TAS2R3Q9NYW6 316 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 DHDHQ9UQ10 334 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 EXOSC1Q9Y3B2 195 aaKnown RBP9.6□□□□□ -0.87
VRK1-204ENST00000555351 SESN1Q9Y6P5 492 aa9.6□□□□□ -0.87
VRK1-204ENST00000555351 IGKV1-12A0A0C4DH73 117 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 E9PI62 339 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 MAGEB3O15480 346 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 OR2H2O95918 312 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 IGKV1D-12P01611 117 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 ALDOBP05062 364 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 HCKP08631 526 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 RAB3AP20336 220 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 COX7A1P24310 79 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 ZP1P60852 638 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 ADARB1P78563 741 aaKnown RBP9.59□□□□□ -0.87
VRK1-204ENST00000555351 PAX5Q02548 391 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 CDK5R1Q15078 307 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 SLC35E4Q6ICL7 350 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 ZNF782Q6ZMW2 699 aaPredicted RBP9.59□□□□□ -0.87
VRK1-204ENST00000555351 RTN4RL2Q86UN3 420 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 OR4S1Q8NGB4 309 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 OR4C13Q8NGP0 309 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 TSEN15Q8WW01 171 aaKnown RBP9.59□□□□□ -0.87
VRK1-204ENST00000555351 C17orf50Q8WW18 174 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 PDCD1LG2Q9BQ51 273 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 NPFFR1Q9GZQ6 430 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 TMEM133Q9H2Q1 129 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 PPA2Q9H2U2 334 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 IL36RNQ9UBH0 155 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 DIMT1Q9UNQ2 313 aaKnown RBP9.59□□□□□ -0.87
VRK1-204ENST00000555351 GSTK1Q9Y2Q3 226 aa9.59□□□□□ -0.87
VRK1-204ENST00000555351 TRGV10A0A0A0MS01 117 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 A0A0G2JK05 382 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 OGG1O15527 345 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 INMTO95050 263 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 ARG1P05089 322 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 TMEM225BP0DP42 221 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 MYL12AP19105 171 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 CD34P28906 385 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 GABRA5P31644 462 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 ETV1P50549 477 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 EFNB2P52799 333 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 KRTAP10-3P60369 221 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 EDDM3AQ14507 147 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 SMN1Q16637 294 aaKnown RBP9.58□□□□□ -0.88
VRK1-204ENST00000555351 ASPHD2Q6ICH7 369 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 HEPN1Q6WQI6 88 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 ASCL4Q6XD76 172 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 DHRSXQ8N5I4 330 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 OR51T1Q8NGJ9 327 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 OR52N1Q8NH53 320 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 RFT1Q96AA3 541 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 CLEC7AQ9BXN2 247 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 CHST6Q9GZX3 395 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 MMP27Q9H306 513 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 TCF7L1Q9HCS4 588 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 BABAM2Q9NXR7 383 aa9.58□□□□□ -0.88
VRK1-204ENST00000555351 MEGF8Q7Z7M0 2845 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 IGHV2-26A0A0B4J1V2 119 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 H3BUI4 141 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 SIRPB1O00241 398 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 DUSP1P28562 367 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 KCNJ3P48549 501 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 SRSF4Q08170 494 aaKnown RBP9.57□□□□□ -0.88
VRK1-204ENST00000555351 IL13RA2Q14627 380 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 NHLRC3Q5JS37 347 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 Q6P435 159 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 LHFPL4Q7Z7J7 247 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 Q8N2B8 174 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 OR5D18Q8NGL1 313 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 OR2T6Q8NHC8 308 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 RGP1Q92546 391 aaPredicted RBP9.57□□□□□ -0.88
VRK1-204ENST00000555351 CREB3L1Q96BA8 519 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 SMIM19Q96E16 107 aa9.57□□□□□ -0.88
VRK1-204ENST00000555351 TMEM80Q96HE8 168 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms