RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 hADV38S2A0JD32 116 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 DNAJC9-AS1A6NH13 148 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 GABRPO00591 440 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 MGST3O14880 152 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 DEGS1O15121 323 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 ZNF737O75373 536 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 PAHP00439 452 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 IGKV1D-12P01611 117 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 CSTBP04080 98 aaKnown RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 FSTP19883 344 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 TGFBR2P37173 567 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 PTGFRP43088 359 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 UBA52P62987 128 aaKnown RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 ACSM1Q08AH1 577 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 DEFB112Q30KQ8 113 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 TMEM200BQ69YZ2 307 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 METAP1DQ6UB28 335 aaPredicted RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 PRSS48Q7RTY5 328 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 TRAPPC6BQ86SZ2 158 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 JAGN1Q8N5M9 183 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 CHST4Q8NCG5 386 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 FAM216AQ8WUB2 273 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 DUX5Q96PT3 197 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 NR1H4Q96RI1 486 aaPredicted RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 TMED9Q9BVK6 235 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 SEBOXQ9HB31 216 aaPredicted RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 NOX4Q9NPH5 578 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 ING4Q9UNL4 249 aa9.94□□□□□ -0.82
SRP54-206ENST00000555317 SF3B6Q9Y3B4 125 aaKnown RBP9.94□□□□□ -0.82
SRP54-206ENST00000555317 TRBV5-7A0A0A0MS05 114 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 MDFIC2A0A1B0GVS7 189 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 TMEM82A0PJX8 343 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 ZNF780AO75290 641 aaPredicted RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 HTR3BO95264 441 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 OR2H2O95918 312 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 MAS1P04201 325 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 PRTN3P24158 256 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 CRHBPP24387 322 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 OR3A4PP47883 348 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 ERVFRD-1P60508 538 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 RPS11P62280 158 aaKnown RBP eCLIP9.93□□□□□ -0.82
SRP54-206ENST00000555317 MEF2CQ06413 473 aaPredicted RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 KLRD1Q13241 179 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 DOC2BQ14184 412 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 RNF144BQ7Z419 303 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 Q8N7P7 452 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 NKAIN3Q8N8D7 197 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 ZDHHC22Q8N966 263 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 OR10K1Q8NGX5 313 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 SGCDQ92629 289 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 GCDHQ92947 438 aaPredicted RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 ORAI1Q96D31 301 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 ZNF48Q96MX3 618 aaPredicted RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 DERL3Q96Q80 235 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 OR5M11Q96RB7 305 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 DUSP21Q9H596 190 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 HEXA-AS1Q9H8Q6 139 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 UNKLQ9H9P5 680 aaKnown RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 ESM1Q9NQ30 184 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 FOXJ3Q9UPW0 622 aa9.93□□□□□ -0.82
SRP54-206ENST00000555317 LSM2Q9Y333 95 aaKnown RBP9.93□□□□□ -0.82
SRP54-206ENST00000555317 TRAV8-7A0A075B6U6 113 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 TRGV10A0A0A0MS01 117 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 A0A1W2PRD5 423 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 A0A1W2PRF3 423 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 A0A1W2PRM7 423 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 MEIOCA2RUB1 952 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 BTBD17A6NE02 478 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 RNASEK-C17orf49H0YIS7 233 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 NPFFO15130 113 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 GPX5O75715 221 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 CDRT1O95170 752 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 FBP1P09467 338 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 ZNF728P0DKX0 622 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 CCL3L1P16619 93 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 IGFBP3P17936 291 aaPredicted RBP9.92□□□□□ -0.82
SRP54-206ENST00000555317 SERPINA2P20848 420 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 OR3A1P47881 315 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 UBE2E1P51965 193 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 PRB3Q04118 309 aaPredicted RBP9.92□□□□□ -0.82
SRP54-206ENST00000555317 GPR50Q13585 617 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 GPR176Q14439 515 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 ZNF273Q14593 569 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 IL13RA2Q14627 380 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 IRF3Q14653 427 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 PAN3Q58A45 887 aaKnown RBP9.92□□□□□ -0.82
SRP54-206ENST00000555317 LIPKQ5VXJ0 399 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 ELP2Q6IA86 826 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 ASPHD2Q6ICH7 369 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 C17orf107Q6ZR85 190 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 OR4S1Q8NGB4 309 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 SSMEM1Q8WWF3 244 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 ZNF714Q96N38 554 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 SLITRK2Q9H156 845 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 PPA2Q9H2U2 334 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 TCF7L1Q9HCS4 588 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 TNFRSF19Q9NS68 423 aa9.92□□□□□ -0.82
SRP54-206ENST00000555317 SOX21Q9Y651 276 aaPredicted RBP9.92□□□□□ -0.82
SRP54-206ENST00000555317 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms