RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 EGR1P18146 543 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NPBWR2P48146 333 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 IL18Q14116 193 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 ESCO2Q56NI9 601 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 FAM201AQ5SY85 155 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 CYB5R2Q6BCY4 276 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 PYHIN1Q6K0P9 492 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-218ENST00000555213 C19orf18Q8NEA5 215 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 OR10K1Q8NGX5 313 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 SLAMF9Q96A28 289 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NEIL1Q96FI4 390 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-218ENST00000555213 S100A13Q99584 98 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NRIP2Q9BQI9 281 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM246Q9BRR3 403 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NICN1Q9BSH3 213 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 CCDC32Q9BV29 185 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TM2D1Q9BX74 207 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 ATG5Q9H1Y0 275 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 BANF2Q9H503 90 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 TMEM165Q9HC07 324 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 NLKQ9UBE8 527 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 GHRLQ9UBU3 117 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 ELF5Q9UKW6 265 aaPredicted RBP9.12□□□□□ -0.95
SHMT2-218ENST00000555213 KCNK7Q9Y2U2 307 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 DYSFO75923 2080 aa9.12□□□□□ -0.95
SHMT2-218ENST00000555213 IGHV3OR15-7A0A075B7D8 119 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 MEIOCA2RUB1 952 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 B4DSR2 109 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 WNT9BO14905 357 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 SOCS1O15524 211 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ADAM20O43506 726 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 GSTZ1O43708 216 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 FOXH1O75593 365 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ACAA1P09110 424 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 UBBP0CG47 229 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 IL7P13232 177 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 CAPZA1P52907 286 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 TAS2R20P59543 309 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 RPS27AP62979 156 aaKnown RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 DGCR2P98153 550 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF260Q3ZCT1 412 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 SLC22A6Q4U2R8 563 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 PYDC2Q56P42 97 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 PLAC9Q5JTB6 97 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 SIGIRRQ6IA17 410 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 SLC36A1Q7Z2H8 476 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 SAXO1Q8IYX7 474 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 Q8N402 240 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 LINC01356Q8N9X3 169 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 OR51F2Q8NH61 342 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 KCNG3Q8TAE7 436 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 GCDHQ92947 438 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 EMG1Q92979 244 aaKnown RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 FAM46BQ96A09 425 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 THAP7Q9BT49 309 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 DNTTIP1Q9H147 329 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ELL3Q9HB65 397 aaPredicted RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 PATZ1Q9HBE1 687 aaKnown RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 RHOFQ9HBH0 211 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ABCB10Q9NRK6 738 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 IL36GQ9NZH8 169 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF581Q9P0T4 197 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 TBC1D24Q9ULP9 559 aa9.11□□□□□ -0.95
SHMT2-218ENST00000555213 MRPS7Q9Y2R9 242 aaKnown RBP9.11□□□□□ -0.95
SHMT2-218ENST00000555213 F8P00451 2351 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 CHD3Q12873 2000 aaKnown RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 TRAV18A0A075B6X5 111 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 A0A1W2PQ09 198 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 OR2AT4A6NND4 320 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 TMPRSS2O15393 492 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 MPIG6BO95866 241 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 GYPAP02724 150 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 MSMBP08118 114 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 MELTFP08582 738 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 IGHV4-31P0DP07 118 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF16P17020 682 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 IL2RGP31785 369 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 RANBP1P43487 201 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 VEGFCP49767 419 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 NPY4RP50391 375 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 LMO4P61968 165 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 GNB2P62879 340 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 RSU1Q15404 277 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 STUMQ69YW2 141 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 ELP2Q6IA86 826 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 C16orf87Q6PH81 154 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 CLEC9AQ6UXN8 241 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 ACP7Q6ZNF0 438 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 GLCCI1Q86VQ1 547 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 TRIM63Q969Q1 353 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 Q96M66 194 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 ZNF488Q96MN9 340 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 SSBP3Q9BWW4 388 aaPredicted RBP9.1□□□□□ -0.95
SHMT2-218ENST00000555213 METTL9Q9H1A3 318 aa9.1□□□□□ -0.95
SHMT2-218ENST00000555213 WDR13Q9H1Z4 485 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms