RNA–Protein interactions for RNA: ENST00000554467.5

SHMT2-212, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 3,416 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-212ENST00000554467 PTX4Q96A99 478 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 CNTNAP3BQ96NU0 1288 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 RCC2Q9P258 522 aaKnown RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 TLN1Q9Y490 2541 aaKnown RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 BLVRBP30043 206 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 DHRS2Q13268 280 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 FOXRED2Q8IWF2 684 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 PP6455Q8WZ26 134 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 TRIB1Q96RU8 372 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ST6GALNAC5Q9BVH7 336 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ZDHHC11Q9H8X9 412 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 BCO1Q9HAY6 547 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 TREM1Q9NP99 234 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM100Q9NV29 134 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 IFITM10A6NMD0 228 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 AGTR1P30556 359 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ARFRP1Q13795 201 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF345Q14585 488 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 C11orf87Q6NUJ2 197 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 ASCL5Q7RTU5 278 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 P4HA3Q7Z4N8 544 aa10.1□□□□□ -0.79
SHMT2-212ENST00000554467 HDHD3Q9BSH5 251 aaPredicted RBP10.1□□□□□ -0.79
SHMT2-212ENST00000554467 PCNX1Q96RV3 2341 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 C9orf170A2RU37 121 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 C1orf196B1AJZ1 125 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 NRASP01111 189 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 ATP1B3P54709 279 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 SNU13P55769 128 aaKnown RBP10.09□□□□□ -0.79
SHMT2-212ENST00000554467 IL13RA1P78552 427 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 SPATA46Q5T0L3 261 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 ATPAF1Q5TC12 328 aaPredicted RBP10.09□□□□□ -0.79
SHMT2-212ENST00000554467 C6orf201Q7Z4U5 140 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 DYRK2Q92630 601 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 NRIP2Q9BQI9 281 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 RELNP78509 3460 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF850A8MQ14 1090 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 IL18BPO95998 194 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 ZNF735P0CB33 412 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 FAM157CP0CG43 387 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 HIST1H1DP16402 221 aaKnown RBP10.09□□□□□ -0.79
SHMT2-212ENST00000554467 TAF9Q16594 264 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 PYY3Q5JQD4 70 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 NCMAPQ5T1S8 102 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 PLCXD3Q63HM9 321 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 CNEP1R1Q8N9A8 125 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 TMEM229BQ8NBD8 167 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 OR5AP2Q8NGF4 316 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 CHD8Q9HCK8 2581 aa10.09□□□□□ -0.79
SHMT2-212ENST00000554467 hCG_38984A0A1B0GV85 526 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 OR14I1A6ND48 311 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 OR2F2O95006 317 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 OR2F1Q13607 317 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 RNPS1Q15287 305 aaKnown RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 RYDENQ9NUL5 291 aaKnown RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 TREM2Q9NZC2 230 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF724A8MTY0 619 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 F5H0A9 414 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 K7EM74 188 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 SDCBPO00560 298 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 KLK10O43240 276 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 LYZL6O75951 148 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 CEACAM1P13688 526 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 EIF2S3P41091 472 aaKnown RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 AKIRIN2Q53H80 203 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 MYPOPQ86VE0 399 aaPredicted RBP10.08□□□□□ -0.8
SHMT2-212ENST00000554467 OR56B2PQ8NGI1 322 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 OR13C8Q8NGS7 320 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 PPP1R1CQ8WVI7 109 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 LINC00470Q9BZP3 86 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 CST11Q9H112 138 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 STARD10Q9Y365 291 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 CADP27708 2225 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 A0A0A6YYH2 397 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 A6NJ64 397 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 ZNF205O95201 554 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 DEFA6Q01524 100 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 PPP1R1AQ13522 171 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 CLINT1Q14677 625 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 KRTAP27-1Q3LI81 207 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 PIGYQ3MUY2 71 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 ISOC2Q96AB3 205 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 MRGPRFQ96AM1 343 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 BORCS8Q96FH0 119 aa10.08□□□□□ -0.8
SHMT2-212ENST00000554467 IGKV1-12A0A0C4DH73 117 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 IGHV3-64DA0A0J9YX35 117 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 FAM221AA4D161 298 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 IGKV1D-12P01611 117 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 CD74P04233 296 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 CELA3BP08861 270 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 SLC25A4P12235 298 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 NBL1P41271 181 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 RSU1Q15404 277 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 CALHM1Q8IU99 346 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 C15orf54Q8N8G6 183 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 TAAR6Q96RI8 345 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 URM1Q9BTM9 101 aaKnown RBP10.07□□□□□ -0.8
SHMT2-212ENST00000554467 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
SHMT2-212ENST00000554467 VSIG4Q9Y279 399 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 ICE1Q9Y2F5 2266 aa10.07□□□□□ -0.8
SHMT2-212ENST00000554467 NBASA2RRP1 2371 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms