RNA–Protein interactions for RNA: ENST00000553745.5

ABCD4-219, Transcript of ATP binding cassette subfamily D member 4, human

TSL 2

Gene ABCD4, Length 1,770 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-219	ENST00000553745	ASCL4	Q6XD76	172 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	ARRDC1	Q8N5I2	433 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	ADAD2	Q8NCV1	583 aa	Known RBP	12	□□□□□ -0.49
ABCD4-219	ENST00000553745	CSNK2A3	Q8NEV1	391 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	OR10K1	Q8NGX5	313 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	TERB2	Q8NHR7	220 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	MAB21L2	Q9Y586	359 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	ZNF462	Q96JM2	2506 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	FXYD6-FXYD2	A0A087WZ82	144 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	ARPC5	O15511	151 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	SERPINA2	P20848	420 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	BLVRB	P30043	206 aa	Predicted RBP	12	□□□□□ -0.49
ABCD4-219	ENST00000553745	PRDX4	Q13162	271 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	CNN3	Q15417	329 aa	Known RBP	12	□□□□□ -0.49
ABCD4-219	ENST00000553745	NHLRC3	Q5JS37	347 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	VHLL	Q6RSH7	139 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745		Q96M66	194 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	CITED4	Q96RK1	184 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	FXYD6	Q9H0Q3	95 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	NGB	Q9NPG2	151 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	GPR132	Q9UNW8	380 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	SPEF1	Q9Y4P9	236 aa		12	□□□□□ -0.49
ABCD4-219	ENST00000553745	IGKV1-27	A0A075B6S5	117 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	TUBAL3	A6NHL2	446 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	IQCF6	A8MYZ5	107 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	CST4	P01036	141 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	RPA2	P15927	270 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	TUBG1	P23258	451 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	CPT2	P23786	658 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	GLRX	P35754	106 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	FABP6	P51161	128 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	GMFB	P60983	142 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	ARFRP1	Q13795	201 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	ARL6IP1	Q15041	203 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	ZNF718	Q3SXZ3	478 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	MBNL2	Q5VZF2	373 aa	Known RBP	11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	ADAM5	Q6NVV9	412 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	TMEM65	Q6PI78	240 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	MOB3C	Q70IA8	216 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	LHFPL1	Q86WI0	220 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	C1orf174	Q8IYL3	243 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	MARCH1	Q8TCQ1	289 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	HPSE2	Q8WWQ2	592 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	FGF23	Q9GZV9	251 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	TUBG2	Q9NRH3	451 aa		11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	ZNF230	Q9UIE0	474 aa	Predicted RBP	11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	PURG	Q9UJV8	347 aa	Known RBP	11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	NOP16	Q9Y3C1	178 aa	Known RBP	11.99	□□□□□ -0.49
ABCD4-219	ENST00000553745	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	FAM230A	A0A1W2PPH8	454 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	DBX1	A6NMT0	343 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	ANKRD30BL	A7E2S9	258 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	SERPINE3	A8MV23	424 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	PRKACB	P22694	351 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	GCH1	P30793	250 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	MTCP1	P56278	107 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	IL13RA1	P78552	427 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	NCMAP	Q5T1S8	102 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	SLC22A25	Q6T423	547 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	ZDHHC23	Q8IYP9	409 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	TMEM185A	Q8NFB2	350 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	NUP37	Q8NFH4	326 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	TMEM171	Q8WVE6	324 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	PLPPR2	Q96GM1	343 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	S100A13	Q99584	98 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	GSX2	Q9BZM3	304 aa		11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	ESRP2	Q9H6T0	727 aa	Known RBP	11.98	□□□□□ -0.49
ABCD4-219	ENST00000553745	SIAH2	O43255	324 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	TIMM8A	O60220	97 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	B3GALNT1	O75752	331 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	DUS4L	O95620	317 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	SLC25A4	P12235	298 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	SELE	P16581	610 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	KITLG	P21583	273 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	CA6	P23280	308 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	TAS2R31	P59538	309 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	RPS23	P62266	143 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	PEG10	Q86TG7	708 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	LRP11	Q86VZ4	500 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	DMRTC2	Q8IXT2	367 aa	Predicted RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	OR5H2	Q8NGV7	314 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	OR13G1	Q8NGZ3	307 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	TMEM230	Q96A57	120 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	BORCS8	Q96FH0	119 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	TECTB	Q96PL2	329 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	PHB2	Q99623	299 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	METTL9	Q9H1A3	318 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	SPTBN1	Q01082	2364 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	ANKHD1	Q8IWZ3	2542 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	PLCE1	Q9P212	2302 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	OR5H14	A6NHG9	310 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	RNF224	P0DH78	156 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	TMEM225B	P0DP42	221 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	ZNF250	P15622	560 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	AMY2B	P19961	511 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	SNU13	P55769	128 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	AADACL3	Q5VUY0	350 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	THOC7	Q6I9Y2	204 aa	Known RBP	11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	SIGIRR	Q6IA17	410 aa		11.97	□□□□□ -0.49
ABCD4-219	ENST00000553745	LHFPL2	Q6ZUX7	228 aa		11.97	□□□□□ -0.49

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