RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ZNF736B4DX44 427 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-209ENST00000553659 ICMTO60725 284 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 RAB3DO95716 219 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 NRASP01111 189 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
ACTN1-209ENST00000553659 VEGFCP49767 419 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 DVL1P1P54792 670 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-209ENST00000553659 GNG2P59768 71 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 MDP1Q86V88 176 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 FAM89BQ8N5H3 189 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 CPEB3Q8NE35 698 aaKnown RBP13.54□□□□□ -0.24
ACTN1-209ENST00000553659 GIMAP1Q8WWP7 306 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 RAB3CQ96E17 227 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 MRPS24Q96EL2 167 aaKnown RBP13.54□□□□□ -0.24
ACTN1-209ENST00000553659 IFT46Q9NQC8 304 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 B3GNT2Q9NY97 397 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 IL36GQ9NZH8 169 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 ING4Q9UNL4 249 aa13.54□□□□□ -0.24
ACTN1-209ENST00000553659 C5orf63A6NC05 138 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 TMEM235A6NFC5 223 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 LYNX1G3V0Z9 82 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 HLA-HP01893 362 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 LYNX1P0DP58 116 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 PTHLHP12272 177 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 ANOS1P23352 680 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 MTCP1P56278 107 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 GUCA2AQ02747 115 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 ZNF92Q03936 586 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 MOGAT2Q3SYC2 334 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 MRPL21Q7Z2W9 205 aaKnown RBP13.53□□□□□ -0.24
ACTN1-209ENST00000553659 TRAPPC6BQ86SZ2 158 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 ZSCAN4Q8NAM6 433 aaPredicted RBP13.53□□□□□ -0.24
ACTN1-209ENST00000553659 PXT1Q8NFP0 134 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 OR2AE1Q8NHA4 323 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 CCDC107Q8WV48 283 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 POM121L2Q96KW2 1035 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 PRRT1Q99946 306 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 GPR173Q9NS66 373 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 SLC2A8Q9NY64 477 aa13.53□□□□□ -0.24
ACTN1-209ENST00000553659 C5orf49A4QMS7 147 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 SERPINE3A8MV23 424 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 B4DSR2 109 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ARPC1BO15143 372 aaKnown RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 CST4P01036 141 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 CD3DP04234 171 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 MGMTP16455 207 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ACKR3P25106 362 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ERP29P30040 261 aaKnown RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ZP1P60852 638 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 SLC22A6Q4U2R8 563 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ASCL4Q6XD76 172 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 GLDNQ6ZMI3 551 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 OR51T1Q8NGJ9 327 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 MRPL24Q96A35 216 aaKnown RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 DACT3Q96B18 629 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 SPACA5Q96QH8 159 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 NKX3-1Q99801 234 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 GAL3ST1Q99999 423 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 GINS4Q9BRT9 223 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 SELENOIQ9C0D9 397 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ALX4Q9H161 411 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 MS4A5Q9H3V2 200 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 MYEF2Q9P2K5 600 aaKnown RBP13.52□□□□□ -0.25
ACTN1-209ENST00000553659 ANAPC10Q9UM13 185 aa13.52□□□□□ -0.25
ACTN1-209ENST00000553659 LOC100509620A0A075B734 347 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 UBE2QL1A1L167 161 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 H3BUI4 141 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 AKR7A2O43488 359 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 CREBL2O60519 120 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 SNAPC5O75971 98 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 C1QBP02746 253 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 CSTBP04080 98 aaKnown RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 ANXA3P12429 323 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 ZNF35P13682 527 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 CD83Q01151 205 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 TBC1D28Q2M2D7 210 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 RNASE10Q5GAN6 216 aaKnown RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 C12orf54Q6X4T0 127 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 NOXA1Q86UR1 476 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 ZNF75AQ96N20 296 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 MRPL37Q9BZE1 423 aaKnown RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 RANGRFQ9HD47 186 aaPredicted RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 NKIRAS2Q9NYR9 191 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 PAIP2BQ9ULR5 123 aaKnown RBP13.51□□□□□ -0.25
ACTN1-209ENST00000553659 SPEF1Q9Y4P9 236 aa13.51□□□□□ -0.25
ACTN1-209ENST00000553659 M0R233 179 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 MFNGO00587 321 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 TPD52L2O43399 206 aaKnown RBP13.5□□□□□ -0.25
ACTN1-209ENST00000553659 SSNA1O43805 119 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 TMEM225BP0DP42 221 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 NAT1P18440 290 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 TUBG1P23258 451 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 GLRXP35754 106 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
ACTN1-209ENST00000553659 CBX3Q13185 183 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 RSU1Q15404 277 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 MSMPQ1L6U9 139 aa13.5□□□□□ -0.25
ACTN1-209ENST00000553659 TMEM255AQ5JRV8 349 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms