RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 COPS3Q9UNS2 423 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PIGLQ9Y2B2 252 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 NAV3Q8IVL0 2385 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 CSMD2Q7Z408 3487 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TLN2Q9Y4G6 2542 aa3.9□□□□□ -1.78
ATXN3-220ENST00000553491 IGLV5-37A0A075B6J1 123 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4EA0A075B759 164 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 IGHV3OR15-7A0A075B7D8 119 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 A0A1B0GVI7 797 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 A0A1W2PP11 408 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FAM230AA0A1W2PPH8 454 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ANXA2P2A6NMY6 339 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 VGLL3A8MV65 326 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4DF5H284 164 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 H3BSA7 217 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MLNRO43193 412 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MPZL2O60487 215 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 GMDSO60547 372 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 LMX1BO60663 402 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF254O75437 659 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MTRF1O75570 445 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 HTR1AP08908 422 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ACAA1P09110 424 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4FP0DN26 164 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 IGHV4-31P0DP07 118 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ANOS1P23352 680 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 CFL1P23528 166 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 GIFP27352 417 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SRP14P37108 136 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 DDOSTP39656 456 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OPRL1P41146 370 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SNRPGP62308 76 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 LCN2P80188 198 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FAM3AP98173 230 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SLC34A1Q06495 639 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 RIPPLY1Q0D2K3 151 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PRDX4Q13162 271 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MPPED2Q15777 294 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PCK2Q16822 640 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 C9orf152Q5JTZ5 239 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FAM201AQ5SY85 155 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MEDAGQ5VYS4 303 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 TTC23Q5W5X9 447 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 DHRS7BQ6IAN0 325 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FAM166AQ6J272 317 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 TEX38Q6PEX7 206 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF826PQ6ZT77 177 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SSX6Q7RTT6 188 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 C1orf87Q8N0U7 546 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FTMTQ8N4E7 242 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 RFLNBQ8N5W9 214 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 GCSAMQ8N6F7 178 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ZBTB8BQ8NAP8 495 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OR5T2Q8NGG2 359 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OR8B12Q8NGG6 310 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 CLDND2Q8NHS1 167 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 CNIH3Q8TBE1 160 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 TRMT10AQ8TBZ6 339 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 NPRL2Q8WTW4 380 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MRPL48Q96GC5 212 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OR8B4Q96RC9 309 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 MICU1Q9BPX6 476 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SLC30A2Q9BRI3 323 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ADAT1Q9BUB4 502 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 KRTAP2-2Q9BYT5 123 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SLC22A4Q9H015 551 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SHARPINQ9H0F6 387 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 METTL17Q9H7H0 456 aaPredicted RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 FN3KRPQ9HA64 309 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 GPR84Q9NQS5 396 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 GPR173Q9NS66 373 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 DDX28Q9NUL7 540 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM106BQ9NUM4 274 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 CHCHD3Q9NX63 227 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 DCAF16Q9NXF7 216 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF319Q9P2F9 582 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OR52A1Q9UKL2 312 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SLC22A13Q9Y226 551 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 NOP16Q9Y3C1 178 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 RHBDD3Q9Y3P4 386 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 RPL36Q9Y3U8 105 aaKnown RBP3.9□□□□□ -1.79
ATXN3-220ENST00000553491 WIPI2Q9Y4P8 454 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PPIAL4AQ9Y536 164 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 PCDHGB1Q9Y5G3 927 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 SNX5Q9Y5X3 404 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 NPTNQ9Y639 398 aa3.9□□□□□ -1.79
ATXN3-220ENST00000553491 OTOGQ6ZRI0 2925 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ACOD1A6NK06 481 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 PRR32B1ATL7 298 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 B4DSR2 109 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 ZNF732B4DXR9 585 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 TMEM178BH3BS89 294 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SYT7O43581 403 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 CD5LO43866 347 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 FADS2O95864 444 aaKnown RBP3.89□□□□□ -1.79
ATXN3-220ENST00000553491 PNPP00491 289 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 SERPINA3P01011 423 aa3.89□□□□□ -1.79
ATXN3-220ENST00000553491 NRASP01111 189 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms