RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 LINC00596Q86U02 117 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 ZDHHC22Q8N966 263 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 OR5H2Q8NGV7 314 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 DYNC2LI1Q8TCX1 351 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 PPWD1Q96BP3 646 aaKnown RBP2.97□□□□□ -1.93
SCFD1-209ENST00000553280 PGLYRP3Q96LB9 341 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 YPEL4Q96NS1 127 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 APOL4Q9BPW4 351 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 HDHD2Q9H0R4 259 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 RDH14Q9HBH5 336 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 IL37Q9NZH6 218 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 RBM12B-AS1Q9P1G2 102 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 RWDD2AQ9UIY3 292 aa2.97□□□□□ -1.93
SCFD1-209ENST00000553280 TSPOAP1O95153 1857 aa2.96□□□□□ -1.93
SCFD1-209ENST00000553280 IGLV3-12A0A075B6K2 115 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 TRAV40A0A0B4J280 105 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 LRCOL1A6NCL2 159 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 I3L4J1 428 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 LGALS9O00182 355 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 TOX3O15405 576 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-209ENST00000553280 PDCD6O75340 191 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 IGKV3-11P04433 115 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF32P17041 273 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 PRTN3P24158 256 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 PRDX1Q06830 199 aaKnown RBP2.96□□□□□ -1.94
SCFD1-209ENST00000553280 COTL1Q14019 142 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 TRMT10CQ7L0Y3 403 aaKnown RBP2.96□□□□□ -1.94
SCFD1-209ENST00000553280 GALNT10Q86SR1 603 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 APCDD1LQ8NCL9 501 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 OR6K3Q8NGY3 331 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 DDIT4LQ96D03 193 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 THTPAQ9BU02 230 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF717Q9BY31 904 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-209ENST00000553280 UPF3BQ9BZI7 483 aaKnown RBP2.96□□□□□ -1.94
SCFD1-209ENST00000553280 SLC25A31Q9H0C2 315 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 LINC00574Q9H8X3 128 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 TAC3Q9UHF0 121 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 FBXL3Q9UKT7 428 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF780BQ9Y6R6 833 aa2.96□□□□□ -1.94
SCFD1-209ENST00000553280 CABIN1Q9Y6J0 2220 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 C2orf16Q68DN1 1984 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 FAM183AA6NL82 134 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 COLCA2A8K830 154 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 CEACAM18A8MTB9 384 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 C9J4A7 227 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 PRAMEF26H0Y7S4 382 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 J3QLI3 93 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 ITGB1BP1O14713 200 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 SYNGR1O43759 233 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 RAB36O95755 333 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 CA2P00918 260 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 OCMP0CE72 109 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-209ENST00000553280 MPV17P39210 176 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 NUDT2P50583 147 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 FUT5Q11128 374 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 ZNHIT3Q15649 155 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-209ENST00000553280 TIMM23BQ5SRD1 257 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 FAM162BQ5T6X4 162 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 FAM104BQ5XKR9 115 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 MED27Q6P2C8 311 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 CLEC18BQ6UXF7 455 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 H1FOOQ8IZA3 346 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-209ENST00000553280 MIR7-3HGQ8N6C7 128 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 OR8A1Q8NGG7 326 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 WDR34Q96EX3 536 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 LINC00477Q96M19 166 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 TAPBPLQ9BX59 468 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 WDR54Q9H977 334 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 CYTL1Q9NRR1 136 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 ATP6V1DQ9Y5K8 247 aa2.95□□□□□ -1.94
SCFD1-209ENST00000553280 RAD50Q92878 1312 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 H3BP45 60 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 MPZL2O60487 215 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 UGT2B11O75310 529 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 CD40LGP29965 261 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 STC1P52823 247 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 KRTAP10-8P60410 259 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 UBE2G2P60604 165 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 RHOAP61586 193 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 MOBPQ13875 183 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 HSP90B2PQ58FF3 399 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 NIPAL1Q6NVV3 410 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 SLC25A34Q6PIV7 304 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 PLEKHG7Q6ZR37 379 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 FA2HQ7L5A8 372 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 ZNF709Q8N972 641 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 ATP6V1C2Q8NEY4 427 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 C7orf50Q9BRJ6 194 aaKnown RBP2.94□□□□□ -1.94
SCFD1-209ENST00000553280 FAAP24Q9BTP7 215 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 DHX35Q9H5Z1 703 aaKnown RBP2.94□□□□□ -1.94
SCFD1-209ENST00000553280 RHOFQ9HBH0 211 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 TMEM38BQ9NVV0 291 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 COMMD9Q9P000 198 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 TMEM131Q92545 1883 aa2.94□□□□□ -1.94
SCFD1-209ENST00000553280 SETD1AO15047 1707 aaKnown RBP2.93□□□□□ -1.94
SCFD1-209ENST00000553280 RAB3GAP2Q9H2M9 1393 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 TRAV8-3A0A0A6YYJ7 113 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 C1orf232A0A0U1RR37 186 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 GMNCA6NCL1 334 aa2.93□□□□□ -1.94
SCFD1-209ENST00000553280 FABP12A6NFH5 140 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms