RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 ARHGAP21Q5T5U3 1957 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 ATRXP46100 2492 aa3.83□□□□□ -1.8
SCFD1-208ENST00000553278 TSPOAP1O95153 1857 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 PLB1Q6P1J6 1458 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 LOC102724200A0A096LPH7 203 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-208ENST00000553278 IGHV3-49A0A0A0MS15 119 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 IGKV6-21A0A0C4DH24 114 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 LRRN3E7EW58 273 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 MAS1P04201 325 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 PYCR1P32322 319 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 ACTR1BP42025 376 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 MEF2CQ06413 473 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-208ENST00000553278 MGAT3Q09327 533 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 UAP1Q16222 522 aaPredicted RBP3.82□□□□□ -1.8
SCFD1-208ENST00000553278 SSX1Q16384 188 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 DEFB116Q30KQ4 102 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 PRNTQ86SH4 94 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 LINC01551Q86U37 167 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 OR5T1Q8NG75 326 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 DTD1Q8TEA8 209 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 OR51E2Q9H255 320 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 PSTPIP2Q9H939 334 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF355PQ9NSJ1 428 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 FAM206AQ9NX38 181 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.82□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF780BQ9Y6R6 833 aa3.82□□□□□ -1.8
SCFD1-208ENST00000553278 TRAV8-3A0A0A6YYJ7 113 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 C9JQL5 133 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 GOLGA6L19H0YKK7 550 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 PANO1I0J062 215 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 FFAR1O14842 300 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 STX10O60499 249 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 IGLV3-25P01717 112 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 SERPINA6P08185 405 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 C1GALT1C1LP0DN25 315 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 NQO1P15559 274 aaKnown RBP3.81□□□□□ -1.8
SCFD1-208ENST00000553278 TGM4P49221 684 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 CEBPGP53567 150 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 C1QTNF8P60827 252 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 MLLT11Q13015 90 aaPredicted RBP3.81□□□□□ -1.8
SCFD1-208ENST00000553278 FADDQ13158 208 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 HLA-DRB5Q30154 266 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 WDR86Q86TI4 376 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 LINC00596Q86U02 117 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 ORMDL3Q8N138 153 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 Q8N402 240 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF461Q8TAF7 563 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 CHMP6Q96FZ7 201 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 YPEL4Q96NS1 127 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 ZIM3Q96PE6 472 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 DHRS9Q9BPW9 319 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 FBXL15Q9H469 300 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 TP53TG1Q9Y2A0 90 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 TBL2Q9Y4P3 447 aaKnown RBP3.81□□□□□ -1.8
SCFD1-208ENST00000553278 SNX10Q9Y5X0 201 aa3.81□□□□□ -1.8
SCFD1-208ENST00000553278 MEGF6O75095 1541 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 TINCRA0A1B0GVN0 87 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 MYBPHLA2RUH7 354 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 PFDN6O15212 129 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 GYG2O15488 501 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 COX7A2P2O60397 106 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 CNMDO75829 334 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 VAMP5O95183 116 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 CA2P00918 260 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF806P0C7X5 589 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 C8orf88P0DMB2 117 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 SCGB1C2P0DMR2 95 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 IL1RNP18510 177 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 ELK4P28324 431 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 CXCL12P48061 93 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 CKAP4Q07065 602 aaKnown RBP3.8□□□□□ -1.8
SCFD1-208ENST00000553278 FBXL22Q6P050 247 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 CASP12Q6UXS9 341 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 SPNS3Q6ZMD2 512 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 PDPNQ86YL7 162 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 ITPRIPQ8IWB1 547 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF433Q8N7K0 673 aaPredicted RBP3.8□□□□□ -1.8
SCFD1-208ENST00000553278 GATD1Q8NB37 220 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 SCGB1C1Q8TD33 95 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 MBOAT7Q96N66 472 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 ANAPC13Q9BS18 74 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 PLA2G2FQ9BZM2 168 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 PRR34Q9NV39 138 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 RBM12B-AS1Q9P1G2 102 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 TBX21Q9UL17 535 aa3.8□□□□□ -1.8
SCFD1-208ENST00000553278 SETD1AO15047 1707 aaKnown RBP3.79□□□□□ -1.8
SCFD1-208ENST00000553278 TMEM210A6NLX4 147 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 A8MWL6 223 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 AZIN1O14977 448 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 CYB5R3P00387 301 aaPredicted RBP3.79□□□□□ -1.8
SCFD1-208ENST00000553278 CD99P14209 185 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 OPRK1P41145 380 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 CDKN2CP42773 168 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 TAS2R43P59537 309 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 ZNF235Q14590 738 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 ELOCQ15369 112 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 C4orf26Q17RF5 130 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 ZFP1Q6P2D0 407 aa3.79□□□□□ -1.8
SCFD1-208ENST00000553278 FAM19A5Q7Z5A7 132 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms