RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 FAM90A8PA6NJQ4 464 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 RBP4P02753 201 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 CDK1P06493 297 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 MEF2CQ06413 473 aaPredicted RBP15.69■□□□□ 0.1
PTCH1-227ENST00000553256 MIDNQ504T8 468 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 YIF1BQ5BJH7 314 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 LDLRAD2Q5SZI1 272 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 OR51T1Q8NGJ9 327 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 CDCA4Q9BXL8 241 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 VCXQ9H320 206 aa15.69■□□□□ 0.1
PTCH1-227ENST00000553256 TRAV8-7A0A075B6U6 113 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 A0A0G2JK05 382 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 A0A1W2PRD5 423 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 A0A1W2PRF3 423 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 A0A1W2PRM7 423 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 MAGEA13PA6NCF6 341 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 ERICH4A6NGS2 130 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 ODF3BA8MYP8 253 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 PIN1P1O15428 100 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 CYB5AP00167 134 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 HCKP08631 526 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 OCM2P0CE71 109 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 ZNF728P0DKX0 622 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 FSTP19883 344 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 MYF6P23409 242 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 WNT4P56705 351 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 SLC35A2P78381 396 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 BLMHQ13867 455 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 Q499Y3 187 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 TPRX1Q8N7U7 411 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 NKX3-1Q99801 234 aaPredicted RBP15.68■□□□□ 0.1
PTCH1-227ENST00000553256 ANKRD60Q9BZ19 345 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 CHST6Q9GZX3 395 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 MEGF9Q9H1U4 602 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 DUSP21Q9H596 190 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 C1RLQ9NZP8 487 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 GSTK1Q9Y2Q3 226 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 SF3B6Q9Y3B4 125 aaKnown RBP15.68■□□□□ 0.1
PTCH1-227ENST00000553256 MMP24Q9Y5R2 645 aa15.68■□□□□ 0.1
PTCH1-227ENST00000553256 SLC33A1O00400 549 aaPredicted RBP15.67■□□□□ 0.1
PTCH1-227ENST00000553256 MGST3O14880 152 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 CSN2P05814 226 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 FBP1P09467 338 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 MTNR1BP49286 362 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 GP2P55259 537 aaKnown RBP15.67■□□□□ 0.1
PTCH1-227ENST00000553256 FOXL1Q12952 345 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 GRK1Q15835 563 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 FIP1L1Q6UN15 594 aaKnown RBP15.67■□□□□ 0.1
PTCH1-227ENST00000553256 BEND2Q8NDZ0 799 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 COQ2Q96H96 371 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 NEK6Q9HC98 313 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 TMEM138Q9NPI0 162 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 CHCHD3Q9NX63 227 aaKnown RBP15.67■□□□□ 0.1
PTCH1-227ENST00000553256 IL36GQ9NZH8 169 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 LINC00312Q9Y6C7 94 aa15.67■□□□□ 0.1
PTCH1-227ENST00000553256 A0A1W2PPH5 198 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 MEX3AA1L020 520 aaKnown RBP15.66■□□□□ 0.1
PTCH1-227ENST00000553256 MEIOCA2RUB1 952 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 SIRPB1O00241 398 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 NDUFA7O95182 113 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 CD2P06729 351 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 IGHV1-8P0DP01 117 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 TMEM225BP0DP42 221 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 EEF1B2P24534 225 aaKnown RBP15.66■□□□□ 0.1
PTCH1-227ENST00000553256 OR3A4PP47883 348 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 SNU13P55769 128 aaKnown RBP15.66■□□□□ 0.1
PTCH1-227ENST00000553256 P2RX3P56373 397 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 TAS2R43P59537 309 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 RPL15P61313 204 aaKnown RBP15.66■□□□□ 0.1
PTCH1-227ENST00000553256 BDH1Q02338 343 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 MED21Q13503 144 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 GDPD3Q7L5L3 318 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 STX19Q8N4C7 294 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 OR11H6Q8NGC7 330 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 PIFOQ8TCI5 191 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 DYRK2Q92630 601 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 CORO2AQ92828 525 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 ZNF747Q9BV97 191 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 HEXA-AS1Q9H8Q6 139 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 EXOSC4Q9NPD3 245 aaKnown RBP15.66■□□□□ 0.1
PTCH1-227ENST00000553256 ZNF581Q9P0T4 197 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 PCDHGB5Q9Y5G0 923 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 NBEAL1Q6ZS30 2694 aa15.66■□□□□ 0.1
PTCH1-227ENST00000553256 TRAV24A0A0B4J272 114 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 SH2D1BO14796 132 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 MMP23AO75900 390 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 CGB3P0DN86 165 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 CGB7P0DN87 165 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 GABRR1P24046 479 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 PTGFRP43088 359 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 BMXP51813 675 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 EDDM3BP56851 147 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 PAX5Q02548 391 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 NHLRC3Q5JS37 347 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 DYNAPQ8N1N2 210 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 CHST4Q8NCG5 386 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 TNFAIP8L1Q8WVP5 186 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 DERL3Q96Q80 235 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 OR14A2Q96R54 314 aa15.65■□□□□ 0.1
PTCH1-227ENST00000553256 OR5M11Q96RB7 305 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms