RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 ZNF728P0DKX0 622 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 EDN2P20800 178 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 CD24P25063 80 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 FASP25445 335 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 RBM34P42696 430 aaKnown RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 CDKN2CP42773 168 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SLC7A2P52569 658 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ACTR3P61158 418 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ISL1P61371 349 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 HIST1H3AP68431 136 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 CDK6Q00534 326 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF616Q08AN1 781 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 FLOT2Q14254 428 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 KPNB1Q14974 876 aaKnown RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 RSPO1Q2MKA7 263 aaPredicted RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SLC36A3Q495N2 470 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 C6orf10Q5SRN2 563 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 LRIF1Q5T3J3 769 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 HIST2H3PS2Q5TEC6 136 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 C8orf82Q6P1X6 216 aaPredicted RBP3.99□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM65Q6PI78 240 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ACP7Q6ZNF0 438 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 HIST2H3AQ71DI3 136 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 GTSCR1Q86UQ5 136 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ANKRD13BQ86YJ7 626 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 TIGD4Q8IY51 512 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ZDHHC23Q8IYP9 409 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 FTMTQ8N4E7 242 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF561Q8N587 486 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 OR4M1Q8NGD0 313 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF596Q8TC21 504 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 DCUN1D4Q92564 292 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SNAPC3Q92966 411 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 MAL2Q969L2 176 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ASB9Q96DX5 294 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SH3GL1Q99961 368 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 FAM110AQ9BQ89 295 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF426Q9BUY5 554 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 IFT27Q9BW83 186 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 NDEL1Q9GZM8 345 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 WDR13Q9H1Z4 485 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 RERGLQ9H628 205 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 PPP1R3EQ9H7J1 279 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SP140LQ9H930 580 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ABCB9Q9NP78 766 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ACTR3BQ9P1U1 418 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 ABCD2Q9UBJ2 740 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 SLC7A7Q9UM01 511 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 POMPQ9Y244 141 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 AP3M1Q9Y2T2 418 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 MOB4Q9Y3A3 225 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 MED31Q9Y3C7 131 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 HSPE1-MOB4S4R3N1 261 aa3.99□□□□□ -1.77
CKAP4-203ENST00000553039 PRSS37A4D1T9 235 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 MAGEA13PA6NCF6 341 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 TMEM210A6NLX4 147 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CPSF4LA6NMK7 179 aaKnown RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OOSP1A8MZH6 123 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 FXYD1O00168 92 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 SLC33A1O00400 549 aaPredicted RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 NME4O00746 187 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OGG1O15527 345 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 FGF16O43320 207 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 AKR7A2O43488 359 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 FKBP6O75344 327 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 IL1AP01583 271 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 IGHG2P01859 326 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 NPSP0C0P6 89 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 PSG2P11465 335 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 HSD17B1P14061 328 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CCL3L1P16619 93 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CFL1P23528 166 aaKnown RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 IL12AP29459 219 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CRABP1P29762 137 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 PRDX2P32119 198 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 IFNA8P32881 189 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 PRRX1P54821 245 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ESRRGP62508 458 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ACTA2P62736 377 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ACTG2P63267 376 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ACTC1P68032 377 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ACTA1P68133 377 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 ZNF92Q03936 586 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 TRAP1Q12931 704 aaKnown RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 RCN1Q15293 331 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 RBMY1FQ15415 496 aaKnown RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 PLAC9Q5JTB6 97 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 PAGE3Q5JUK9 113 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OR52W1Q6IF63 320 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 BCDIN3DQ7Z5W3 292 aaKnown RBP3.98□□□□□ -1.77
CKAP4-203ENST00000553039 RTN4RL2Q86UN3 420 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 NAA40Q86UY6 237 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CADM3Q8N126 398 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 RNF148Q8N7C7 305 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 MAPKAPK5-AS1Q8N8E1 139 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 CSNK2A3Q8NEV1 391 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OR8J3Q8NGG0 315 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 OR4C15Q8NGM1 316 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 SLC26A7Q8TE54 656 aa3.98□□□□□ -1.77
CKAP4-203ENST00000553039 UBE2E2Q96LR5 201 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms